Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC096922.1-201ENST00000461635 651 ntBASIC6.73□□□□□ -1.33
SOX1O00570 RN7SL326P-201ENST00000477493 296 ntBASIC6.73□□□□□ -1.33
SOX1O00570 RN7SL705P-201ENST00000481678 294 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AC090013.1-201ENST00000485147 480 ntBASIC6.73□□□□□ -1.33
SOX1O00570 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX1O00570 RN7SKP31-201ENST00000516354 278 ntBASIC6.73□□□□□ -1.33
SOX1O00570 RN7SKP66-201ENST00000516681 231 ntBASIC6.73□□□□□ -1.33
SOX1O00570 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SOX1O00570 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX1O00570 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX1O00570 AC091489.2-201ENST00000566263 604 ntBASIC6.73□□□□□ -1.33
SOX1O00570 MTCO3P13-201ENST00000577757 781 ntBASIC6.73□□□□□ -1.33
SOX1O00570 MIR4436B2-201ENST00000581415 91 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX1O00570 MIR4436B1-201ENST00000583272 91 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX1O00570 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 AL049634.3-201ENST00000604968 457 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AC098614.4-201ENST00000607601 462 ntBASIC6.73□□□□□ -1.33
SOX1O00570 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.73□□□□□ -1.33
SOX1O00570 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 AP000577.1-201ENST00000624366 878 ntBASIC6.73□□□□□ -1.33
SOX1O00570 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
SOX1O00570 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 AL136981.1-203ENST00000451452 3844 ntBASIC6.73□□□□□ -1.33
SOX1O00570 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.73□□□□□ -1.33
SOX1O00570 DCAF13P3-201ENST00000561147 1334 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AF131215.2-201ENST00000531549 1710 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AC079949.2-201ENST00000617117 2933 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AL592429.1-201ENST00000403909 1473 ntBASIC6.73□□□□□ -1.33
SOX1O00570 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 SAGE3P-201ENST00000619800 1635 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AC092725.2-201ENST00000567658 1389 ntBASIC6.72□□□□□ -1.33
SOX1O00570 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX1O00570 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SOX1O00570 RPL21P132-201ENST00000331267 462 ntBASIC6.72□□□□□ -1.33
SOX1O00570 RNY4P14-201ENST00000363656 96 ntBASIC6.72□□□□□ -1.33
SOX1O00570 RNA5SP88-201ENST00000365560 109 ntBASIC6.72□□□□□ -1.33
SOX1O00570 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 RN7SKP62-201ENST00000384539 329 ntBASIC6.72□□□□□ -1.33
SOX1O00570 MT-TD-201ENST00000387419 68 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AC016397.1-201ENST00000412463 242 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 AC092647.1-201ENST00000420654 287 ntBASIC6.72□□□□□ -1.33
SOX1O00570 OFD1P18Y-201ENST00000420889 959 ntBASIC6.72□□□□□ -1.33
SOX1O00570 NPM1P24-201ENST00000428039 894 ntBASIC6.72□□□□□ -1.33
SOX1O00570 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AL512649.1-201ENST00000428997 581 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX1O00570 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 AC012075.1-201ENST00000436549 580 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AC244505.5-201ENST00000443639 207 ntBASIC6.72□□□□□ -1.33
SOX1O00570 DPPA3P1-201ENST00000448050 469 ntBASIC6.72□□□□□ -1.33
SOX1O00570 HIGD1AP8-201ENST00000453927 274 ntBASIC6.72□□□□□ -1.33
SOX1O00570 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX1O00570 RN7SL714P-201ENST00000487050 298 ntBASIC6.72□□□□□ -1.33
SOX1O00570 SETP14-201ENST00000497538 873 ntBASIC6.72□□□□□ -1.33
SOX1O00570 MTCYBP18-201ENST00000501056 747 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.72□□□□□ -1.33
SOX1O00570 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX1O00570 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 PTGES3P3-201ENST00000511479 482 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.72□□□□□ -1.33
SOX1O00570 OR5D15P-201ENST00000531671 942 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AP004607.2-201ENST00000533949 322 ntBASIC6.72□□□□□ -1.33
SOX1O00570 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX1O00570 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.72□□□□□ -1.33
SOX1O00570 GTF2IP8-201ENST00000560687 584 ntBASIC6.72□□□□□ -1.33
SOX1O00570 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 MIR4776-2-201ENST00000580204 80 ntBASIC6.72□□□□□ -1.33
SOX1O00570 UBE2V2P2-201ENST00000587677 504 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AC020914.6-201ENST00000594327 272 ntBASIC6.72□□□□□ -1.33
SOX1O00570 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.72□□□□□ -1.33
SOX1O00570 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 AL157700.1-201ENST00000561973 1432 ntBASIC6.72□□□□□ -1.33
SOX1O00570 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
SOX1O00570 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SOX1O00570 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX1O00570 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms