Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC108751.5-201ENST00000492880 1336 ntBASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.68□□□□□ -1.66
TMX2-CTNND1H3BSU7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 MTND5P12-201ENST00000502851 1449 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC069213.2-201ENST00000420238 366 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 RPS27AP7-201ENST00000422792 455 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 FABP7P1-201ENST00000424004 391 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 CENPIP1-201ENST00000425713 902 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 RPL12P28-201ENST00000430852 489 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNU1-6P-201ENST00000516290 144 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC105036.1-201ENST00000566222 271 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC010424.2-201ENST00000607594 443 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC074140.1-201ENST00000621617 208 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC087821.1-201ENST00000623639 567 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL596275.2-204ENST00000641628 552 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL596275.2-206ENST00000641957 626 ntBASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TMX2-CTNND1H3BSU7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 SNORA73.1-201ENST00000363107 205 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 SNORA70F-201ENST00000384142 135 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 CYCSP10-201ENST00000417973 294 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL450023.3-201ENST00000440592 271 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 RHEBP2-201ENST00000450289 600 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC104971.1-201ENST00000495117 578 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 SCARNA22-201ENST00000503991 125 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC073358.1-201ENST00000505671 684 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 RFPL4AP5-201ENST00000514977 504 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 RN7SKP46-201ENST00000515942 234 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 RNA5SP249-201ENST00000516127 99 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 MIR4675-201ENST00000577898 77 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC107993.1-201ENST00000591343 684 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AL139041.1-201ENST00000605480 610 ntBASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
TMX2-CTNND1H3BSU7 AC068254.2-201ENST00000623938 3577 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms