Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC006116.6-201ENST00000593258 1103 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC104785.1-201ENST00000603220 588 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 PRR13P3-201ENST00000603578 376 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 BNIP3P11-201ENST00000603878 563 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL445264.1-201ENST00000621719 171 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC010338.1-201ENST00000621823 717 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC006378.2-201ENST00000623178 2476 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AP002505.2-201ENST00000623585 696 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ATE1-AS1-202ENST00000636460 506 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC092070.2-203ENST00000598377 3644 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AP003175.1-201ENST00000641383 6658 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC079097.1-201ENST00000512187 1399 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
SHISA3A0PJX4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.77□□□□□ -1.48
SHISA3A0PJX4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL512353.3-201ENST00000417517 1326 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 DLEU2L-201ENST00000371086 3555 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RN7SKP237-201ENST00000364663 301 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RN7SKP55-201ENST00000364888 307 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 FAUP2-201ENST00000394301 401 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL390316.1-201ENST00000406279 553 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 VN1R8P-201ENST00000407739 893 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 Y_RNA.608-201ENST00000410647 95 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 CYCSP52-201ENST00000422857 310 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RPS24P8-201ENST00000431490 402 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL358934.1-201ENST00000432346 324 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC105052.2-201ENST00000434317 794 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL672138.1-201ENST00000450604 1015 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 BX322784.1-201ENST00000455793 1077 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 MEMO1P3-201ENST00000459811 302 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC008620.1-201ENST00000468453 592 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RN7SL37P-201ENST00000490461 307 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 NACAP6-201ENST00000509572 622 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 SCARNA15.1-201ENST00000516384 125 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 Y_RNA.693-201ENST00000516641 110 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RN7SKP11-201ENST00000517018 287 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AP003467.2-201ENST00000520175 319 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 COX6B1P6-201ENST00000522347 255 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC140063.1-201ENST00000541343 259 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 RPL21P5-201ENST00000554662 472 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC025678.1-201ENST00000567861 338 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 MIR4307-201ENST00000582802 84 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 MIR4786-201ENST00000583954 80 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AL138960.1-201ENST00000613838 513 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 AC009159.1-201ENST00000618386 642 ntBASIC5.77□□□□□ -1.49
SHISA3A0PJX4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.77□□□□□ -1.49
SHISA3A0PJX4 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms