Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 AC020910.3-201ENST00000603701 874 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 AL121932.1-201ENST00000605542 214 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 AC009704.2-201ENST00000618739 483 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 AC005086.4-201ENST00000623065 213 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 AC006453.5-201ENST00000636451 619 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 MAPK10-303ENST00000641324 3959 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 EOGT-210ENST00000615922 1931 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 SMG1P6-201ENST00000532337 2930 ntBASIC3.6□□□□□ -1.83
HLA-DRB4X5D2U9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 RNU6-729P-201ENST00000384399 107 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 ATP5F1P2-201ENST00000398143 760 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 U3.35-201ENST00000408405 208 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 RNA5SP104-201ENST00000410989 118 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 VN1R37P-201ENST00000419096 748 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 EIF4HP2-201ENST00000424380 563 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 DYNLL1P7-201ENST00000429273 258 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC112498.1-201ENST00000444401 332 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 snoU13.20-201ENST00000459180 104 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC112184.1-201ENST00000505179 312 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 GAPDHP56-201ENST00000506031 988 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 OR5M14P-201ENST00000506803 618 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 RNA5SP392-201ENST00000516905 112 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AP000676.2-201ENST00000529711 301 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 CYCSP28-201ENST00000534284 321 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC079075.1-201ENST00000559543 878 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC087468.1-201ENST00000604365 630 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DRB4X5D2U9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DRB4X5D2U9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC107027.3-201ENST00000565095 3473 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 RNA5SP123-201ENST00000363244 119 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 RNU1-83P-201ENST00000363426 164 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AL645927.1-201ENST00000396783 406 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AL589647.1-201ENST00000402485 466 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 LINC00993-201ENST00000420453 540 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 RGS17P1-201ENST00000423358 553 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 RPS17P8-201ENST00000434525 335 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC011753.3-201ENST00000443436 406 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC234781.3-201ENST00000452540 973 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 RPL23AP56-201ENST00000460778 453 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 RPS26P28-201ENST00000470806 348 ntBASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DRB4X5D2U9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms