Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 Z99497.2-201ENST00000603634 310 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC107952.2-201ENST00000606048 486 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 PART1_2.1-201ENST00000612397 250 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 CASC19-222ENST00000641321 1173 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 ZNF733P-202ENST00000444809 1573 ntBASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CTDP1Q9Y5B0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 RNA5SP326-201ENST00000363209 110 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 RNU1-59P-201ENST00000364829 162 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 GNG5P2-201ENST00000372054 207 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AL133388.1-201ENST00000404509 287 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AL449283.1-202ENST00000418249 604 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC090960.1-201ENST00000421072 306 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 GAPDHP58-201ENST00000438477 1006 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 EEF1B2P5-201ENST00000444820 548 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 ZNF886P-201ENST00000450781 723 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC005532.2-201ENST00000467154 373 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 HPRT1P1-201ENST00000509498 657 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AP003033.1-201ENST00000527244 415 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC137627.1-201ENST00000545761 289 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC104229.1-201ENST00000561364 255 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC009094.1-201ENST00000564443 426 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC080013.3-201ENST00000606839 578 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC126915.2-201ENST00000610957 190 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC011939.3-201ENST00000613686 466 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 U1.25-201ENST00000614085 162 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 VN1R9P-201ENST00000614184 867 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC009318.3-201ENST00000616916 503 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 U1.31-201ENST00000620022 160 ntBASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CTDP1Q9Y5B0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CTDP1Q9Y5B0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 Y_RNA.169-201ENST00000363745 96 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 SNORD116-1-201ENST00000384335 95 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 RNA5SP105-201ENST00000391123 113 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AP002784.2-201ENST00000397300 549 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 DEFB130D-201ENST00000426866 237 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC007563.3-201ENST00000433233 371 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 MTCO3P5-201ENST00000433620 714 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 THAP5P1-201ENST00000439089 262 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 RPL21P131-201ENST00000497298 483 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms