Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SNRPGP1-201ENST00000553864 222 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 EIF3FP1-201ENST00000613970 806 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AL354696.1-201ENST00000614652 497 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AP001005.3-201ENST00000622049 129 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 LINC00216-201ENST00000623548 1126 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC025574.1-201ENST00000554784 1653 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 CTSL3P-202ENST00000412179 788 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AL590806.1-201ENST00000415818 853 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 BTF3P6-201ENST00000448054 499 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 MTND2P3-201ENST00000452458 470 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AL645937.3-201ENST00000453647 936 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 SBDSP1-204ENST00000453858 737 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC096741.1-201ENST00000472250 846 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 RN7SL591P-201ENST00000496150 292 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 NPM1P35-201ENST00000533043 868 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC005868.1-201ENST00000536421 331 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 OR1F2P-201ENST00000570470 933 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 TVP23CP2-201ENST00000571473 623 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC008536.1-201ENST00000602872 669 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC024940.4-201ENST00000605507 246 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 AC007382.1-201ENST00000624376 2618 ntBASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATG4BQ9Y4P1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 RN7SKP104-201ENST00000362605 328 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 RNU4-44P-201ENST00000363050 141 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 MIR550A3-201ENST00000390735 95 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL021331.1-201ENST00000402817 582 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL357515.1-201ENST00000402967 542 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL034374.1-201ENST00000406329 351 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 RPL26P37-201ENST00000411983 438 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL590762.4-201ENST00000425885 253 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC245517.2-201ENST00000442890 346 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC012512.1-201ENST00000446594 718 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 TPT1P1-201ENST00000458495 518 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC021205.1-201ENST00000468797 348 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC025181.1-201ENST00000477507 416 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC140172.1-201ENST00000502928 141 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 HMGB1P47-201ENST00000511281 589 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms