Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.73□□□□□ -1.49
HMG20BQ9P0W2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.73□□□□□ -1.49
HMG20BQ9P0W2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.73□□□□□ -1.49
HMG20BQ9P0W2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMG20BQ9P0W2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMG20BQ9P0W2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMG20BQ9P0W2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMG20BQ9P0W2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 Y_RNA.62-201ENST00000362840 99 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 MIR141-201ENST00000384975 95 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 RNA5SP397-201ENST00000391323 118 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AL121878.1-201ENST00000418638 859 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 EIF4A1P1-201ENST00000420241 934 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 RPS26P4-201ENST00000431743 355 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 RAB9AP5-201ENST00000437794 597 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 RAB9AP2-201ENST00000443911 597 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 RPL36AP41-201ENST00000493820 306 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AC084033.1-201ENST00000550830 633 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AC087477.6-201ENST00000559595 843 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AC018552.1-201ENST00000562099 811 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 AC239803.2-201ENST00000610161 430 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 MIR7641-1-201ENST00000627518 61 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 MAPK10-263ENST00000641052 4307 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMG20BQ9P0W2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.71□□□□□ -1.49
HMG20BQ9P0W2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
HMG20BQ9P0W2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 MTCO1P15-201ENST00000529569 1526 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 OR4K15-201ENST00000305051 1216 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 RPS3AP23-201ENST00000401762 784 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AL592291.1-201ENST00000403830 352 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 SNORA79B-201ENST00000410557 148 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 RPL7P57-201ENST00000423238 740 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 RPL23AP1-201ENST00000428990 471 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AC104651.2-201ENST00000447549 528 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 OR6C72P-201ENST00000451403 892 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 RN7SL346P-201ENST00000491561 294 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 CCNHP1-201ENST00000513311 678 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 RN7SKP92-201ENST00000517266 244 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AP000859.1-201ENST00000525536 307 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AC073137.1-201ENST00000605636 634 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AC015871.5-202ENST00000623252 701 ntBASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.71□□□□□ -1.5
HMG20BQ9P0W2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC126755.2-208ENST00000327792 462 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC138969.1-213ENST00000331436 462 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AL359643.1-201ENST00000404109 423 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 MIR1271-201ENST00000408537 86 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 RN7SKP267-201ENST00000410381 285 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC006065.1-201ENST00000422539 802 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 H2AFZP5-201ENST00000446960 382 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms