Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAPAQ9P0L0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 U8.4-201ENST00000363626 134 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 RAB9AP4-201ENST00000415230 609 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 CHEK2P3-201ENST00000416118 248 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC096644.3-201ENST00000416788 338 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC004690.1-201ENST00000418216 328 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC002069.1-201ENST00000429649 1159 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 HMGB3P10-201ENST00000434734 572 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC108022.1-201ENST00000493466 478 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 GAPDHP56-201ENST00000506031 988 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 RN7SKP66-201ENST00000516681 231 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 IGLVIV-64-201ENST00000518581 301 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC013701.1-201ENST00000522657 465 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 CD24P2-201ENST00000565486 219 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC011445.2-201ENST00000599274 173 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AL353726.1-201ENST00000614041 1000 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AP003499.2-201ENST00000624100 483 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAPAQ9P0L0 MAPK10-286ENST00000641208 8747 ntBASIC4.39□□□□□ -1.71
VAPAQ9P0L0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 IRF5P1-201ENST00000504852 2164 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC135352.1-201ENST00000506173 1418 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC104297.1-201ENST00000393779 870 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 ATP5F1P2-201ENST00000398143 760 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AL591848.1-201ENST00000413092 322 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 TRGV7-201ENST00000427089 353 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 OR2B7P-201ENST00000429302 934 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AL138787.1-202ENST00000437804 898 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC092647.3-201ENST00000443044 633 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC112498.1-201ENST00000444401 332 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 RPS5P7-201ENST00000456664 608 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 RPL7L1P4-201ENST00000513004 707 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC125612.1-201ENST00000547580 377 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC012146.2-201ENST00000576545 416 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AP005119.2-201ENST00000579735 1105 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 MIR3176-201ENST00000582210 90 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC091178.1-203ENST00000584586 279 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 HMGB2P1-201ENST00000591146 634 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC008966.2-201ENST00000606157 453 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 OR7A19P-201ENST00000608051 733 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AC009704.2-201ENST00000618739 483 ntBASIC4.38□□□□□ -1.71
VAPAQ9P0L0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAPAQ9P0L0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms