Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GJA6P-201ENST00000415117 1042 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 FO393419.3-201ENST00000428741 282 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AL353597.2-202ENST00000434901 373 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 RPS20P4-201ENST00000461659 355 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC005912.1-201ENST00000495392 255 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC027338.1-201ENST00000514840 825 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 NMNAT1P1-201ENST00000554095 876 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 EIF1P5-201ENST00000585002 234 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 OR7E18P-201ENST00000592589 702 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 ZNF92P2-201ENST00000600543 1059 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 PSMA6P4-201ENST00000603247 718 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC104687.2-201ENST00000604442 342 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC005377.1-201ENST00000605126 456 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AC016769.4-201ENST00000616893 535 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 AL355480.1-201ENST00000629041 99 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BLOC1S4Q9NUP1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC010266.2-201ENST00000564741 3255 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 GNG5P5-201ENST00000420444 220 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC073052.1-201ENST00000440417 714 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 RPS27P5-201ENST00000444247 244 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL589765.3-201ENST00000446084 462 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL136520.1-202ENST00000555494 763 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC079148.1-201ENST00000565944 819 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC010503.3-201ENST00000594355 540 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC010487.1-201ENST00000594408 1172 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC018618.2-201ENST00000604770 446 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL445222.1-201ENST00000607259 628 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AL445493.3-201ENST00000619568 477 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AC104623.2-202ENST00000623477 4002 ntBASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
BLOC1S4Q9NUP1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AL512283.1-201ENST00000606756 1384 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 ECM1P2-201ENST00000503354 1577 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 METTL21EP-201ENST00000298105 713 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 VDAC2P1-201ENST00000399358 958 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AL078599.1-201ENST00000402075 293 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC013429.2-201ENST00000418798 781 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 EIF2S2P3-201ENST00000428356 999 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms