Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RN7SKP104-201ENST00000362605 328 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNA5SP123-201ENST00000363244 119 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNU6-40P-201ENST00000384254 107 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNU6-1320P-201ENST00000390838 107 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNU6-1269P-201ENST00000391139 107 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 GAPDHP15-201ENST00000398586 975 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AL034403.1-201ENST00000399414 885 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 CHMP1B2P-201ENST00000399581 597 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AL445213.1-201ENST00000412589 747 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 MTCYBP29-201ENST00000436327 1006 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AC074367.1-201ENST00000438685 1125 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 SLC25A18P1-201ENST00000449385 454 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 MYO5BP2-201ENST00000449815 1277 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AC234781.3-201ENST00000452540 973 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNU6-599P-201ENST00000459383 107 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNU6-1193P-201ENST00000459461 107 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RPSAP50-201ENST00000481955 852 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RN7SKP46-201ENST00000515942 234 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 BUD31P1-201ENST00000521828 359 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 SNX6P1-201ENST00000601728 1224 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AC016542.1-201ENST00000608259 493 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AC253576.2-201ENST00000618815 580 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNU6-368P-201ENST00000620928 107 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 RNU6-538P-201ENST00000622329 107 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 AL672167.1-203ENST00000641299 2975 ntBASIC5.91□□□□□ -1.46
CHD1LQ86WJ1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AP001284.1-201ENST00000528393 2118 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC020633.1-201ENST00000468439 2247 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 RNU4-7P-201ENST00000364758 141 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 OR51B3P-201ENST00000412287 913 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 RPS27P18-201ENST00000431701 247 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 RPS26P2-201ENST00000440331 348 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC112498.1-201ENST00000444401 332 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 MTND3P3-201ENST00000505004 126 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 GAPDHP56-201ENST00000506031 988 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC008628.1-201ENST00000508663 265 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 BTF3P13-201ENST00000513224 490 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC110775.1-201ENST00000513721 462 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC019227.1-201ENST00000526902 510 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC008033.2-201ENST00000542626 177 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC087763.1-201ENST00000603391 286 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC144521.1-201ENST00000607148 956 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 AC091905.4-201ENST00000623432 202 ntBASIC5.9□□□□□ -1.46
CHD1LQ86WJ1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 CIR1P2-201ENST00000514821 1342 ntBASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 TCP1P3-201ENST00000414406 1498 ntBASIC5.9□□□□□ -1.47
CHD1LQ86WJ1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHD1LQ86WJ1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHD1LQ86WJ1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms