Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NUP54Q7Z3B4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 Z73965.1-201ENST00000623412 2297 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 SNORA62.2-201ENST00000364672 152 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 OR1L6-202ENST00000373684 1044 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 MIR223-201ENST00000385204 110 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 RPL35AP24-201ENST00000413846 330 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC108075.1-201ENST00000424692 529 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 MTCO1P52-201ENST00000433928 531 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 PPIAP13-201ENST00000434706 478 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 CBX1P4-201ENST00000439415 457 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 OR52A4P-201ENST00000472867 958 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 COPS8P2-201ENST00000473228 627 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 RPS4XP1-201ENST00000482189 787 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 RPS4XP20-201ENST00000505751 772 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 EIF3KP3-201ENST00000514461 639 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 RNA5SP373-201ENST00000517271 95 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC004923.2-201ENST00000529649 369 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC090022.1-201ENST00000546569 311 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC093014.1-201ENST00000548926 724 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AL512310.9-201ENST00000553311 948 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC009597.2-201ENST00000604659 592 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AL136370.1-201ENST00000608166 691 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 AC090617.9-201ENST00000623751 147 ntBASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
NUP54Q7Z3B4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 SCARNA15-201ENST00000607520 4325 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 OR8V1P-201ENST00000395193 873 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 PTGES3P2-201ENST00000407942 482 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 GTF3AP1-201ENST00000416942 1004 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AL355433.1-201ENST00000422804 300 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AL161722.2-201ENST00000434731 981 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 OR52B5P-201ENST00000435337 951 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 RN7SL172P-201ENST00000460535 303 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 RPS26P39-201ENST00000469206 341 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC006511.1-201ENST00000470614 315 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 NPM1P17-201ENST00000479221 602 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC116562.1-201ENST00000485355 781 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 RNU6-1102P-201ENST00000516149 96 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 SCARNA21.2-201ENST00000516600 166 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 VTA1P2-201ENST00000520205 911 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC027369.5-201ENST00000533838 755 ntBASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.87□□□□□ -1.63
NUP54Q7Z3B4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms