Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 YRDCP3-201ENST00000456507 480 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 SNORD11.1-201ENST00000459482 85 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC021205.1-201ENST00000468797 348 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC091544.1-201ENST00000484702 348 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 RPL7P41-201ENST00000485823 957 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 RNU6-1028P-201ENST00000517164 93 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 OR8I1P-201ENST00000529291 931 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 AP004607.2-201ENST00000533949 322 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 TOMM20P1-201ENST00000534518 427 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 MIR4271-201ENST00000582451 67 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 AC234772.3-201ENST00000602277 528 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 SOCS5P3-201ENST00000425115 1576 ntBASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.78□□□□□ -1.64
SHFQ7M4L6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHFQ7M4L6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
SHFQ7M4L6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
SHFQ7M4L6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 UBBP2-201ENST00000376781 231 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 RNU6-452P-201ENST00000384406 107 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 SNORD65C-201ENST00000390962 71 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC104297.1-201ENST00000393779 870 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 MCTS2P-201ENST00000394552 546 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AF228730.1-201ENST00000397972 663 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC092648.1-201ENST00000425870 423 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC124944.2-201ENST00000429866 1242 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 NOP56P2-201ENST00000447491 769 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC092685.1-201ENST00000447960 1243 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 OR51B8P-201ENST00000449892 769 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 HLA-DPA3-207ENST00000454398 229 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL035090.1-201ENST00000454835 332 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 RN7SL168P-201ENST00000463821 279 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 RPL6P9-201ENST00000466502 859 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 MTCO3P35-201ENST00000485582 781 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC105233.1-201ENST00000498840 781 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 HMGB1P44-201ENST00000508597 572 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC087897.1-201ENST00000550134 156 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL049872.1-201ENST00000556323 322 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC096586.1-201ENST00000610267 561 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 PART1_2.1-201ENST00000612397 250 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC079395.3-201ENST00000615161 484 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC011472.4-201ENST00000615848 491 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 FRG1HP-204ENST00000617940 757 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC006386.1-201ENST00000619436 415 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.77□□□□□ -1.65
SHFQ7M4L6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC011447.7-201ENST00000624228 1590 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 AC000374.1-201ENST00000434698 1745 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms