Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 SOCS5P3-201ENST00000425115 1576 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 RNU6-212P-201ENST00000362642 104 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 SNORD3E-201ENST00000362899 217 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 RNY1-201ENST00000364228 113 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 RNY1P5-201ENST00000383890 115 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 RNA5SP35-201ENST00000391257 129 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 RNU6-493P-201ENST00000391321 108 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC004986.1-201ENST00000414855 607 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 RPL36P1-201ENST00000419720 225 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 YRDCP3-201ENST00000456507 480 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC097493.1-201ENST00000463958 372 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC022730.1-201ENST00000473114 568 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 RPS4XP18-201ENST00000495480 763 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 PABPC1P1-201ENST00000506347 591 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC233724.10-201ENST00000510454 409 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC108120.2-201ENST00000512973 294 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 RNU6-470P-201ENST00000515954 104 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 HMGB1P23-201ENST00000518743 568 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 GLUD1P2-201ENST00000583339 201 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 GLUD1P8-201ENST00000585063 203 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 BNIP3P25-201ENST00000596023 559 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AL589765.5-201ENST00000596133 515 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 AP001485.1-201ENST00000604799 199 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 SNORD58B-201ENST00000607313 66 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 RPL12P38-202ENST00000588627 2319 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARS2Q5ST30 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 AL121835.2-201ENST00000624253 3502 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 RNU6-492P-201ENST00000363035 104 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 SNORD27-201ENST00000363981 72 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 RNU6-593P-201ENST00000364716 112 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 RNU6-190P-201ENST00000384154 102 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 SNORA2C-201ENST00000408564 137 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC099535.1-201ENST00000408928 371 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 PPIAP30-201ENST00000415473 519 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 ARL5AP1-201ENST00000418991 388 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC048351.1-201ENST00000420064 602 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 CR769767.1-201ENST00000436337 346 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
VARS2Q5ST30 GAPDHP14-201ENST00000450472 937 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 RPL37P3-201ENST00000456825 293 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC006512.1-201ENST00000468816 291 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.06□□□□□ -1.12
VARS2Q5ST30 HMGN1P16-201ENST00000508308 283 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC016559.1-201ENST00000511420 199 ntBASIC8.06□□□□□ -1.12
VARS2Q5ST30 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms