Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL159169.2-201ENST00000610061 1269 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AC100847.1-201ENST00000611316 481 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 AP003499.2-201ENST00000624100 483 ntBASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.56□□□□□ -1.52
SHROOM1Q2M3G4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AC104260.2-201ENST00000623551 3497 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 SNORA11-201ENST00000408789 128 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 RSL24D1P6-201ENST00000426934 401 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AC245028.2-201ENST00000458673 253 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AC083829.1-201ENST00000503756 657 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AP005119.2-201ENST00000579735 1105 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 AC004232.3-201ENST00000622977 525 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 TMEM30CP-203ENST00000637814 1035 ntBASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHROOM1Q2M3G4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AL592148.3-201ENST00000608771 2646 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 RPL21P67-201ENST00000402896 478 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AC079809.1-201ENST00000415468 276 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AC234779.1-201ENST00000425910 285 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 EIF2S2P2-201ENST00000447161 982 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 NPM1P39-201ENST00000449818 867 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 MTND2P28-201ENST00000457540 1044 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 RN7SL517P-201ENST00000462240 305 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 RPL36AP41-201ENST00000493820 306 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 MTND4LP2-201ENST00000502312 285 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AGGF1P9-201ENST00000561884 913 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 MIR4284-201ENST00000578924 81 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 MLECP1-201ENST00000615893 709 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 FRG1EP-201ENST00000634469 770 ntBASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHROOM1Q2M3G4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC021146.4-201ENST00000309229 279 ntBASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 RNA5SP479-201ENST00000364858 117 ntBASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC013429.2-201ENST00000418798 781 ntBASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC093166.2-201ENST00000455969 1017 ntBASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 RN7SL41P-201ENST00000476144 297 ntBASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AL161747.1-201ENST00000480068 358 ntBASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 MYL12BP2-201ENST00000503948 512 ntBASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.53□□□□□ -1.52
SHROOM1Q2M3G4 AP005901.4-201ENST00000577336 569 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms