Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL163051.2-201ENST00000618976 735 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AC135068.5-201ENST00000624197 983 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN1BQ07699 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SCN1BQ07699 AC015813.6-201ENST00000624409 5808 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AC063976.2-201ENST00000425667 3556 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN1BQ07699 LINC01963-201ENST00000562038 3148 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SCN1BQ07699 MAPK10-349ENST00000641767 3661 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SCN1BQ07699 MAPK10-286ENST00000641208 8747 ntBASIC4.67□□□□□ -1.66
SCN1BQ07699 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SCN1BQ07699 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.66□□□□□ -1.66
SCN1BQ07699 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SCN1BQ07699 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 RNA5SP394-201ENST00000364216 119 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 RN7SKP275-201ENST00000364626 301 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 MIR551A-201ENST00000385042 96 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 RPS3AP2-201ENST00000407190 754 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 RN7SKP240-201ENST00000410583 375 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN1BQ07699 OR2AT2P-201ENST00000413438 905 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 EIF4A1P1-201ENST00000420241 934 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN1BQ07699 AC007161.1-204ENST00000423039 460 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AC092447.2-201ENST00000435487 669 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN1BQ07699 ELOCP11-201ENST00000436690 332 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 CYCSP12-201ENST00000437729 300 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 DNAJA1P5-201ENST00000440278 943 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.66□□□□□ -1.66
SCN1BQ07699 ELOCP16-201ENST00000444494 332 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN1BQ07699 AC078857.1-201ENST00000469870 667 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 RPL23AP71-201ENST00000470966 469 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AC022795.1-201ENST00000473808 480 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 RN7SL583P-201ENST00000475692 287 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AC023050.1-201ENST00000498198 304 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.66□□□□□ -1.66
SCN1BQ07699 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN1BQ07699 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 HMGB1P23-201ENST00000518743 568 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 NPM1P6-201ENST00000521088 871 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 OR8G3P-201ENST00000533406 921 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 AC079600.1-201ENST00000550326 297 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 IGBP1P1-201ENST00000554337 1009 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AL008729.2-201ENST00000606393 473 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AC017076.1-201ENST00000607613 578 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 SNORD91B-202ENST00000608459 222 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 AC109583.2-201ENST00000617367 129 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AP005431.1-201ENST00000618479 319 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 AL596275.2-204ENST00000641628 552 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 AL596275.2-206ENST00000641957 626 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.66□□□□□ -1.66
SCN1BQ07699 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
SCN1BQ07699 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 AP001273.1-201ENST00000624493 3152 ntBASIC4.66□□□□□ -1.66
SCN1BQ07699 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.66□□□□□ -1.66
SCN1BQ07699 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN1BQ07699 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN1BQ07699 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SCN1BQ07699 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SCN1BQ07699 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SCN1BQ07699 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
SCN1BQ07699 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.65□□□□□ -1.66
SCN1BQ07699 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SCN1BQ07699 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 AC099535.1-201ENST00000408928 371 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 RNU2-6P-201ENST00000411404 190 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 HMGB3P31-201ENST00000413333 595 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 AC013429.2-201ENST00000418798 781 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 RPL24P2-201ENST00000421023 475 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 ACTR3P2-201ENST00000439585 1257 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AC005297.1-201ENST00000444765 862 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AL450996.1-201ENST00000445574 1202 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 EEF1B2P6-201ENST00000445713 673 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms