Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 FABP5P2-201ENST00000439042 408 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 RPS27AP3-201ENST00000453803 454 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 MTCYBP17-201ENST00000503579 789 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC010342.1-201ENST00000514047 877 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AC073581.1-201ENST00000519036 575 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.64□□□□□ -1.35
SOX4Q06945 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.64□□□□□ -1.35
SOX4Q06945 CR383656.6-201ENST00000550518 394 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 AP005119.2-201ENST00000579735 1105 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.64□□□□□ -1.35
SOX4Q06945 AL513218.1-201ENST00000606527 391 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AC098614.4-201ENST00000607601 462 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AP000894.4-201ENST00000610185 483 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AC091834.1-201ENST00000614543 472 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC018816.2-201ENST00000621460 353 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AC138649.3-201ENST00000622154 254 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 AC024023.1-201ENST00000624530 922 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC109315.1-201ENST00000584143 1347 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 CASC19-280ENST00000642102 1351 ntBASIC6.64□□□□□ -1.35
SOX4Q06945 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX4Q06945 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX4Q06945 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX4Q06945 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
SOX4Q06945 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 AC103591.2-201ENST00000265259 766 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 SNORD65.1-201ENST00000390889 71 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 AL356057.2-201ENST00000403318 432 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 FCF1P10-201ENST00000407590 479 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 RNA5SP156-201ENST00000410250 110 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.63□□□□□ -1.35
SOX4Q06945 MTCO1P23-201ENST00000415223 1526 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.63□□□□□ -1.35
SOX4Q06945 AC006065.1-201ENST00000422539 802 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AC104843.2-201ENST00000427666 297 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 MTCO1P54-201ENST00000430139 712 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 AL451136.1-201ENST00000435399 325 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 RPS25P9-201ENST00000435591 252 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AC073614.1-201ENST00000438690 650 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 MTND5P14-201ENST00000441481 1267 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 DPPA3P1-201ENST00000448050 469 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SOX4Q06945 HLA-DPA3-207ENST00000454398 229 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
SOX4Q06945 AC013267.1-201ENST00000458227 267 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AC094085.1-201ENST00000468914 584 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 VPS26AP1-201ENST00000483197 979 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 ACTG1P13-201ENST00000486987 1043 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 AC087808.1-201ENST00000520501 361 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 CENPUP1-201ENST00000526649 1202 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 RPA2P3-201ENST00000533268 770 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms