Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC022884.2-201ENST00000578535 580 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC2.73□□□□□ -1.97
HSPG2P98160 AC005255.1-201ENST00000593748 216 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 AC015967.1-201ENST00000619893 476 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 EIF3EP2-201ENST00000423042 1814 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 RNU1-14P-201ENST00000362759 152 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 RN7SKP74-201ENST00000362849 309 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 Z98745.1-201ENST00000402553 494 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 RPL21P65-201ENST00000406094 466 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 NPM1P36-201ENST00000415681 835 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 AL158827.1-201ENST00000416300 391 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 RPL7P28-201ENST00000437739 740 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 PARP4P3-201ENST00000510265 317 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 NPM1P21-201ENST00000513394 762 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 RNU6-352P-201ENST00000516908 107 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.73□□□□□ -1.97
HSPG2P98160 MEG8-217ENST00000556637 924 ntTSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HSPG2P98160 AC007618.1-201ENST00000366455 732 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 AC090018.1-201ENST00000434369 367 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC2.73□□□□□ -1.97
HSPG2P98160 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 AC006499.5-201ENST00000505037 514 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 AC099522.1-202ENST00000514718 367 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC2.73□□□□□ -1.97
HSPG2P98160 AC011816.2-201ENST00000607089 556 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC2.73□□□□□ -1.97
HSPG2P98160 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 AC027228.2-201ENST00000567141 2154 ntBASIC2.73□□□□□ -1.97
HSPG2P98160 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
HSPG2P98160 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HSPG2P98160 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HSPG2P98160 RNU1-20P-201ENST00000363314 162 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 COX6CP13-201ENST00000428703 226 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 AC091286.1-201ENST00000431233 461 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 AL159987.2-201ENST00000432754 307 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 AL359265.1-201ENST00000440296 795 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 RPS29P2-201ENST00000479278 136 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 AC026427.2-201ENST00000506228 536 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 SCARNA14-201ENST00000516903 136 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 AC090912.3-201ENST00000609775 533 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 AL021997.2-201ENST00000615674 271 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC2.72□□□□□ -1.97
HSPG2P98160 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 AL137141.1-201ENST00000624622 4836 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC2.72□□□□□ -1.97
HSPG2P98160 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 LINC00622-201ENST00000562811 1570 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 ARHGAP42P1-201ENST00000507474 1976 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.72□□□□□ -1.97
HSPG2P98160 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
HSPG2P98160 MIR200C-201ENST00000384980 68 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 ARAFP1-201ENST00000422172 605 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 COX6B1P7-201ENST00000430845 235 ntBASIC2.72□□□□□ -1.97
HSPG2P98160 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.72□□□□□ -1.97
HSPG2P98160 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC2.72□□□□□ -1.97
HSPG2P98160 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms