Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC012020.1-201ENST00000624541 1728 ntBASIC3.56□□□□□ -1.84
CCL20P78556 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 Z97832.1-201ENST00000402490 328 ntBASIC3.56□□□□□ -1.84
CCL20P78556 JKAMPP1-201ENST00000413804 919 ntBASIC3.56□□□□□ -1.84
CCL20P78556 GTF2IP5-201ENST00000414608 731 ntBASIC3.56□□□□□ -1.84
CCL20P78556 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 AC064862.4-201ENST00000442180 334 ntBASIC3.56□□□□□ -1.84
CCL20P78556 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 RPL36AP39-201ENST00000445859 318 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AL935212.3-201ENST00000450729 284 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AC079168.2-201ENST00000453977 416 ntBASIC3.56□□□□□ -1.84
CCL20P78556 MTND6P32-201ENST00000457611 483 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AC090142.1-201ENST00000465776 462 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AC092905.1-201ENST00000467527 949 ntBASIC3.56□□□□□ -1.84
CCL20P78556 RN7SL222P-201ENST00000476452 299 ntBASIC3.56□□□□□ -1.84
CCL20P78556 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.56□□□□□ -1.84
CCL20P78556 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.56□□□□□ -1.84
CCL20P78556 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.56□□□□□ -1.84
CCL20P78556 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.56□□□□□ -1.84
CCL20P78556 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.56□□□□□ -1.84
CCL20P78556 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 SNORD39.2-201ENST00000579995 76 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 ADAD1P2-201ENST00000588476 646 ntBASIC3.56□□□□□ -1.84
CCL20P78556 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 AC096586.2-201ENST00000610260 441 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AL627230.1-201ENST00000613077 211 ntBASIC3.56□□□□□ -1.84
CCL20P78556 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AC005840.5-201ENST00000619166 599 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AP002967.1-201ENST00000624203 539 ntBASIC3.56□□□□□ -1.84
CCL20P78556 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
CCL20P78556 AC097504.1-201ENST00000515103 2415 ntBASIC3.56□□□□□ -1.84
CCL20P78556 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCL20P78556 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.56□□□□□ -1.84
CCL20P78556 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCL20P78556 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC3.55□□□□□ -1.84
CCL20P78556 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.55□□□□□ -1.84
CCL20P78556 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCL20P78556 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCL20P78556 NXF4-202ENST00000416098 1465 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC135352.1-201ENST00000506173 1418 ntBASIC3.55□□□□□ -1.84
CCL20P78556 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCL20P78556 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.55□□□□□ -1.84
CCL20P78556 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCL20P78556 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCL20P78556 SNORA17.1-201ENST00000362945 126 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC104297.1-201ENST00000393779 870 ntBASIC3.55□□□□□ -1.84
CCL20P78556 RPL5P19-201ENST00000404228 893 ntBASIC3.55□□□□□ -1.84
CCL20P78556 FCF1P5-201ENST00000406490 482 ntBASIC3.55□□□□□ -1.84
CCL20P78556 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.55□□□□□ -1.84
CCL20P78556 TRIM60P17-201ENST00000415181 719 ntBASIC3.55□□□□□ -1.84
CCL20P78556 VN1R31P-201ENST00000417498 730 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.55□□□□□ -1.84
CCL20P78556 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.55□□□□□ -1.84
CCL20P78556 CFL1P1-202ENST00000432948 411 ntBASIC3.55□□□□□ -1.84
CCL20P78556 RHOT1P3-201ENST00000436571 331 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AL137845.2-201ENST00000444292 988 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.55□□□□□ -1.84
CCL20P78556 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.55□□□□□ -1.84
CCL20P78556 AL133244.1-201ENST00000456007 258 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC097484.1-201ENST00000471148 389 ntBASIC3.55□□□□□ -1.84
CCL20P78556 RN7SL319P-201ENST00000480656 221 ntBASIC3.55□□□□□ -1.84
CCL20P78556 SYT14P1-201ENST00000481459 721 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC091868.1-201ENST00000508746 304 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.55□□□□□ -1.84
CCL20P78556 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.55□□□□□ -1.84
CCL20P78556 AC011853.1-201ENST00000518911 454 ntBASIC3.55□□□□□ -1.84
CCL20P78556 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.55□□□□□ -1.84
CCL20P78556 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.55□□□□□ -1.84
CCL20P78556 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.55□□□□□ -1.84
CCL20P78556 AC133555.2-201ENST00000550213 292 ntBASIC3.55□□□□□ -1.84
CCL20P78556 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms