Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ACTBP60709 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ACTBP60709 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 AP001002.1-201ENST00000625148 1513 ntBASIC4.16□□□□□ -1.74
ACTBP60709 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 RNA5SP502-201ENST00000362694 119 ntBASIC4.16□□□□□ -1.74
ACTBP60709 SNORA51.1-201ENST00000363243 140 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AL080315.1-201ENST00000406055 466 ntBASIC4.16□□□□□ -1.74
ACTBP60709 MIR1286-201ENST00000408112 78 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AP000534.2-201ENST00000412729 568 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 BX323845.1-201ENST00000432417 179 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AC133473.1-201ENST00000455173 299 ntBASIC4.16□□□□□ -1.74
ACTBP60709 RPS21P4-201ENST00000487122 248 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AC024558.1-201ENST00000505008 528 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.16□□□□□ -1.74
ACTBP60709 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.16□□□□□ -1.74
ACTBP60709 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.16□□□□□ -1.74
ACTBP60709 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.16□□□□□ -1.74
ACTBP60709 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.16□□□□□ -1.74
ACTBP60709 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.16□□□□□ -1.74
ACTBP60709 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.16□□□□□ -1.74
ACTBP60709 AC026979.4-201ENST00000606555 645 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AL512329.2-201ENST00000607350 548 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AP000894.4-201ENST00000610185 483 ntBASIC4.16□□□□□ -1.74
ACTBP60709 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 AC244517.3-201ENST00000616254 1235 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AC015804.1-201ENST00000622935 435 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AP006248.2-201ENST00000623309 592 ntBASIC4.16□□□□□ -1.74
ACTBP60709 AP002505.2-201ENST00000623585 696 ntBASIC4.16□□□□□ -1.74
ACTBP60709 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.16□□□□□ -1.74
ACTBP60709 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.16□□□□□ -1.74
ACTBP60709 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTBP60709 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.16□□□□□ -1.74
ACTBP60709 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ACTBP60709 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.15□□□□□ -1.74
ACTBP60709 ZNF733P-202ENST00000444809 1573 ntBASIC4.15□□□□□ -1.74
ACTBP60709 CYP1D1P-201ENST00000416662 1433 ntBASIC4.15□□□□□ -1.74
ACTBP60709 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ACTBP60709 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 RNU1-94P-201ENST00000362627 173 ntBASIC4.15□□□□□ -1.75
ACTBP60709 RNU1-43P-201ENST00000365052 165 ntBASIC4.15□□□□□ -1.75
ACTBP60709 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.15□□□□□ -1.75
ACTBP60709 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ACTBP60709 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 AL121834.1-202ENST00000404494 277 ntBASIC4.15□□□□□ -1.75
ACTBP60709 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.15□□□□□ -1.75
ACTBP60709 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.15□□□□□ -1.75
ACTBP60709 MTND4LP13-201ENST00000425022 298 ntBASIC4.15□□□□□ -1.75
ACTBP60709 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.15□□□□□ -1.75
ACTBP60709 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.15□□□□□ -1.75
ACTBP60709 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.15□□□□□ -1.75
ACTBP60709 TDGF1P1-201ENST00000445734 527 ntBASIC4.15□□□□□ -1.75
ACTBP60709 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.15□□□□□ -1.75
ACTBP60709 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
ACTBP60709 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.15□□□□□ -1.75
ACTBP60709 AC134349.2-201ENST00000535136 910 ntBASIC4.15□□□□□ -1.75
ACTBP60709 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.15□□□□□ -1.75
ACTBP60709 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.15□□□□□ -1.75
ACTBP60709 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.15□□□□□ -1.75
ACTBP60709 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.15□□□□□ -1.75
ACTBP60709 SNORA74C-1-201ENST00000580726 201 ntBASIC4.15□□□□□ -1.75
ACTBP60709 AC004948.1-201ENST00000609858 672 ntBASIC4.15□□□□□ -1.75
ACTBP60709 AC126915.2-201ENST00000610957 190 ntBASIC4.15□□□□□ -1.75
ACTBP60709 AC022467.1-201ENST00000614738 749 ntBASIC4.15□□□□□ -1.75
ACTBP60709 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.15□□□□□ -1.75
ACTBP60709 MIR6826-201ENST00000617808 98 ntBASIC4.15□□□□□ -1.75
ACTBP60709 AC079298.2-201ENST00000623885 459 ntBASIC4.15□□□□□ -1.75
ACTBP60709 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.15□□□□□ -1.75
ACTBP60709 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.15□□□□□ -1.75
ACTBP60709 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 AC009313.2-201ENST00000417893 1941 ntBASIC4.15□□□□□ -1.75
ACTBP60709 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTBP60709 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms