Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIPK4P57078 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 AC108751.5-201ENST00000492880 1336 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RIPK4P57078 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.01□□□□□ -1.45
RIPK4P57078 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIPK4P57078 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIPK4P57078 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 AC068287.1-201ENST00000430283 295 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 RPL23AP93-201ENST00000440847 484 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 AL161722.1-201ENST00000446972 1032 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 AL162591.2-201ENST00000449634 317 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 AL935212.3-201ENST00000450729 284 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.01□□□□□ -1.45
RIPK4P57078 snoU13.1-201ENST00000459157 104 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
RIPK4P57078 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.01□□□□□ -1.45
RIPK4P57078 AC093890.1-201ENST00000502554 540 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.01□□□□□ -1.45
RIPK4P57078 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.01□□□□□ -1.45
RIPK4P57078 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.01□□□□□ -1.45
RIPK4P57078 AP005119.2-201ENST00000579735 1105 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 MIR4715-201ENST00000584117 79 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 RPL12P25-202ENST00000598100 674 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 AL133243.1-201ENST00000614487 366 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 MIR8069-1-201ENST00000616627 86 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 MIR8069-2-201ENST00000621412 86 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.01□□□□□ -1.45
RIPK4P57078 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.01□□□□□ -1.45
RIPK4P57078 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.01□□□□□ -1.45
RIPK4P57078 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.01□□□□□ -1.45
RIPK4P57078 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.01□□□□□ -1.45
RIPK4P57078 AC083843.2-201ENST00000568248 6253 ntBASIC6.01□□□□□ -1.45
RIPK4P57078 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.01□□□□□ -1.45
RIPK4P57078 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
RIPK4P57078 VN2R3P-201ENST00000422626 1412 ntBASIC6□□□□□ -1.45
RIPK4P57078 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
RIPK4P57078 AC012078.1-201ENST00000405035 1646 ntBASIC6□□□□□ -1.45
RIPK4P57078 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIPK4P57078 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
RIPK4P57078 AC008079.2-201ENST00000623543 20396 ntBASIC6□□□□□ -1.45
RIPK4P57078 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
RIPK4P57078 RNA5-8SP7-201ENST00000363443 155 ntBASIC6□□□□□ -1.45
RIPK4P57078 MIR129-1-201ENST00000384972 72 ntBASIC6□□□□□ -1.45
RIPK4P57078 RPL36AP10-201ENST00000421785 322 ntBASIC6□□□□□ -1.45
RIPK4P57078 RPS27AP7-201ENST00000422792 455 ntBASIC6□□□□□ -1.45
RIPK4P57078 RPL21P43-201ENST00000425440 472 ntBASIC6□□□□□ -1.45
RIPK4P57078 AP001324.1-201ENST00000428553 399 ntBASIC6□□□□□ -1.45
RIPK4P57078 H2AFZP6-201ENST00000444403 394 ntBASIC6□□□□□ -1.45
RIPK4P57078 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIPK4P57078 LDHBP3-201ENST00000514909 822 ntBASIC6□□□□□ -1.45
RIPK4P57078 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6□□□□□ -1.45
RIPK4P57078 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6□□□□□ -1.45
RIPK4P57078 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RIPK4P57078 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6□□□□□ -1.45
RIPK4P57078 AC008782.1-201ENST00000603386 430 ntBASIC6□□□□□ -1.45
RIPK4P57078 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6□□□□□ -1.45
RIPK4P57078 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
RIPK4P57078 AL078595.2-201ENST00000605309 1780 ntBASIC6□□□□□ -1.45
RIPK4P57078 DPY19L2P2-203ENST00000435536 1858 ntBASIC6□□□□□ -1.45
RIPK4P57078 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
RIPK4P57078 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RIPK4P57078 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIPK4P57078 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIPK4P57078 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6□□□□□ -1.45
RIPK4P57078 AL137100.1-201ENST00000556703 1620 ntBASIC5.99□□□□□ -1.45
RIPK4P57078 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RIPK4P57078 RAD17P1-201ENST00000418130 2042 ntBASIC5.99□□□□□ -1.45
RIPK4P57078 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.99□□□□□ -1.45
RIPK4P57078 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIPK4P57078 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.99□□□□□ -1.45
RIPK4P57078 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIPK4P57078 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RIPK4P57078 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.99□□□□□ -1.45
RIPK4P57078 TRGV5P-201ENST00000419915 354 ntBASIC5.99□□□□□ -1.45
RIPK4P57078 RPL7AP25-201ENST00000423357 805 ntBASIC5.99□□□□□ -1.45
RIPK4P57078 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.99□□□□□ -1.45
RIPK4P57078 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.99□□□□□ -1.45
RIPK4P57078 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.99□□□□□ -1.45
RIPK4P57078 TPT1P13-201ENST00000449760 499 ntBASIC5.99□□□□□ -1.45
RIPK4P57078 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIPK4P57078 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.99□□□□□ -1.45
RIPK4P57078 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
RIPK4P57078 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.99□□□□□ -1.45
RIPK4P57078 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.99□□□□□ -1.45
RIPK4P57078 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.99□□□□□ -1.45
RIPK4P57078 IMMP1LP1-201ENST00000605170 488 ntBASIC5.99□□□□□ -1.45
RIPK4P57078 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
RIPK4P57078 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.99□□□□□ -1.45
RIPK4P57078 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIPK4P57078 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIPK4P57078 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIPK4P57078 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIPK4P57078 AC125257.1-201ENST00000560400 2930 ntBASIC5.98□□□□□ -1.45
RIPK4P57078 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms