Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RPL35AP21-201ENST00000437667 333 ntBASIC4.7□□□□□ -1.66
CDH11P55287 PA2G4P6-201ENST00000438325 1197 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH11P55287 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH11P55287 AL096829.2-201ENST00000446582 742 ntBASIC4.7□□□□□ -1.66
CDH11P55287 MRPL35P2-201ENST00000448009 511 ntBASIC4.7□□□□□ -1.66
CDH11P55287 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 AC069277.2-201ENST00000454211 432 ntBASIC4.7□□□□□ -1.66
CDH11P55287 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 RN7SL727P-201ENST00000482164 296 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC004815.1-201ENST00000484185 331 ntBASIC4.7□□□□□ -1.66
CDH11P55287 RPS21P4-201ENST00000487122 248 ntBASIC4.7□□□□□ -1.66
CDH11P55287 RPL32P9-201ENST00000487963 407 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC072052.1-201ENST00000496556 306 ntBASIC4.7□□□□□ -1.66
CDH11P55287 PGAM1P13-201ENST00000507497 754 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC147055.3-201ENST00000510547 851 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC006427.1-201ENST00000514359 712 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AP000859.1-201ENST00000525536 307 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH11P55287 YWHABP2-201ENST00000540201 713 ntBASIC4.7□□□□□ -1.66
CDH11P55287 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH11P55287 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH11P55287 AC127381.1-201ENST00000555979 939 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH11P55287 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH11P55287 OR1AB1P-201ENST00000585564 761 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AL451049.1-201ENST00000608672 497 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC019131.2-201ENST00000609071 870 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AC005156.1-201ENST00000613371 573 ntBASIC4.7□□□□□ -1.66
CDH11P55287 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.7□□□□□ -1.66
CDH11P55287 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH11P55287 AL445528.2-201ENST00000620582 470 ntBASIC4.7□□□□□ -1.66
CDH11P55287 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH11P55287 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH11P55287 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH11P55287 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CDH11P55287 AL022393.1-201ENST00000625142 1677 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AL731566.1-201ENST00000620490 1937 ntBASIC4.7□□□□□ -1.66
CDH11P55287 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH11P55287 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.69□□□□□ -1.66
CDH11P55287 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH11P55287 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH11P55287 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 RNU1-146P-201ENST00000364015 165 ntBASIC4.69□□□□□ -1.66
CDH11P55287 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDH11P55287 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 AL035079.1-201ENST00000405210 287 ntBASIC4.69□□□□□ -1.66
CDH11P55287 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH11P55287 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 RN7SKP213-201ENST00000410746 298 ntBASIC4.69□□□□□ -1.66
CDH11P55287 AL158825.1-201ENST00000414735 521 ntBASIC4.69□□□□□ -1.66
CDH11P55287 OR5M12P-201ENST00000423388 929 ntBASIC4.69□□□□□ -1.66
CDH11P55287 VN1R42P-201ENST00000424651 344 ntBASIC4.69□□□□□ -1.66
CDH11P55287 PTP4A1P3-201ENST00000433661 420 ntBASIC4.69□□□□□ -1.66
CDH11P55287 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH11P55287 AC093716.1-201ENST00000435923 377 ntBASIC4.69□□□□□ -1.66
CDH11P55287 NPM1P33-201ENST00000438918 872 ntBASIC4.69□□□□□ -1.66
CDH11P55287 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH11P55287 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 MTATP6P14-201ENST00000455189 673 ntBASIC4.69□□□□□ -1.66
CDH11P55287 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 RN7SL222P-201ENST00000476452 299 ntBASIC4.69□□□□□ -1.66
CDH11P55287 RPS18P6-201ENST00000476880 458 ntBASIC4.69□□□□□ -1.66
CDH11P55287 NAMPTP2-201ENST00000505629 1115 ntBASIC4.69□□□□□ -1.66
CDH11P55287 BTG4P1-201ENST00000510421 183 ntBASIC4.69□□□□□ -1.66
CDH11P55287 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 AP003355.1-201ENST00000518956 587 ntBASIC4.69□□□□□ -1.66
CDH11P55287 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH11P55287 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH11P55287 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH11P55287 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 MIR3936-201ENST00000584304 110 ntBASIC4.69□□□□□ -1.66
CDH11P55287 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.69□□□□□ -1.66
CDH11P55287 AC108359.1-201ENST00000616451 1211 ntBASIC4.69□□□□□ -1.66
CDH11P55287 AC015914.2-201ENST00000618167 288 ntBASIC4.69□□□□□ -1.66
CDH11P55287 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.69□□□□□ -1.66
CDH11P55287 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH11P55287 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDH11P55287 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH11P55287 AC107021.2-201ENST00000567714 2095 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms