Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CLCNKAP51800 AC083843.2-201ENST00000568248 6253 ntBASIC5.07□□□□□ -1.6
CLCNKAP51800 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCNKAP51800 CASC19-261ENST00000641853 1638 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
CLCNKAP51800 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC073136.1-201ENST00000449426 2884 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 RNA5SP223-201ENST00000365174 120 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AL136131.1-201ENST00000406079 803 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 MTND4P11-201ENST00000417020 1058 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 HYALP1-201ENST00000417674 1279 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC007394.1-201ENST00000421941 531 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC093084.1-201ENST00000424233 687 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 HSPE1P16-201ENST00000426640 348 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC009238.2-201ENST00000431026 355 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 VN1R54P-201ENST00000435210 1049 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCNKAP51800 RPL23AP23-201ENST00000452590 471 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 RPL32P14-201ENST00000463196 378 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 RPL32P9-201ENST00000487963 407 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 RN7SL808P-201ENST00000496066 299 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC231760.1-201ENST00000498002 260 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC110760.3-202ENST00000515177 371 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 RN7SKP260-201ENST00000516907 149 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AP003355.1-201ENST00000518956 587 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC104115.2-201ENST00000523026 687 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCNKAP51800 OR8A2P-201ENST00000528631 952 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCNKAP51800 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC026741.1-201ENST00000605892 482 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC023813.4-201ENST00000607580 580 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC027449.1-201ENST00000608890 407 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC099654.8-201ENST00000637757 681 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AL445984.1-201ENST00000637834 659 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC107027.3-201ENST00000565095 3473 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 AL121950.1-201ENST00000624993 2077 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 NXF4-202ENST00000416098 1465 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AL359715.4-201ENST00000606629 1436 ntBASIC5.06□□□□□ -1.6
CLCNKAP51800 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCNKAP51800 AC005005.4-201ENST00000623789 16698 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCNKAP51800 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC104260.2-201ENST00000623551 3497 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLCNKAP51800 MIR16-2-201ENST00000362117 81 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 MIR122-201ENST00000385044 85 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 CHMP1B2P-201ENST00000399581 597 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC093162.1-201ENST00000419682 124 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC011242.1-201ENST00000433596 1158 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 BX842559.2-201ENST00000451418 605 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 LARP7P4-201ENST00000481075 878 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 AC097173.1-201ENST00000505862 819 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC034244.2-201ENST00000514668 858 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.05□□□□□ -1.6
CLCNKAP51800 AP000676.2-201ENST00000529711 301 ntBASIC5.05□□□□□ -1.6
CLCNKAP51800 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms