Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 AC103591.2-201ENST00000265259 766 ntBASIC5.06□□□□□ -1.6
CASP4P49662 SNORD96B-201ENST00000386148 79 ntBASIC5.06□□□□□ -1.6
CASP4P49662 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 Z74021.1-201ENST00000423610 407 ntBASIC5.06□□□□□ -1.6
CASP4P49662 RPL21P43-201ENST00000425440 472 ntBASIC5.06□□□□□ -1.6
CASP4P49662 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.06□□□□□ -1.6
CASP4P49662 HSPE1P16-201ENST00000426640 348 ntBASIC5.06□□□□□ -1.6
CASP4P49662 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 UBE2V2P1-201ENST00000434717 398 ntBASIC5.06□□□□□ -1.6
CASP4P49662 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 RNA5SP103-201ENST00000459503 118 ntBASIC5.06□□□□□ -1.6
CASP4P49662 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 AC011005.3-201ENST00000491624 395 ntBASIC5.06□□□□□ -1.6
CASP4P49662 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CASP4P49662 DPRXP4-201ENST00000578053 568 ntBASIC5.06□□□□□ -1.6
CASP4P49662 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 AC234782.5-201ENST00000617723 324 ntBASIC5.06□□□□□ -1.6
CASP4P49662 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.06□□□□□ -1.6
CASP4P49662 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
CASP4P49662 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CASP4P49662 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 AP001642.1-201ENST00000624727 2117 ntBASIC5.06□□□□□ -1.6
CASP4P49662 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CASP4P49662 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CASP4P49662 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CASP4P49662 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CASP4P49662 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CASP4P49662 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.05□□□□□ -1.6
CASP4P49662 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CASP4P49662 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CASP4P49662 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CASP4P49662 RNU6-1331P-201ENST00000363658 106 ntBASIC5.05□□□□□ -1.6
CASP4P49662 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CASP4P49662 AL035419.1-201ENST00000397037 564 ntBASIC5.05□□□□□ -1.6
CASP4P49662 RN7SKP106-201ENST00000410832 272 ntBASIC5.05□□□□□ -1.6
CASP4P49662 RBMY2KP-201ENST00000418221 992 ntBASIC5.05□□□□□ -1.6
CASP4P49662 RAB9AP5-201ENST00000437794 597 ntBASIC5.05□□□□□ -1.6
CASP4P49662 RAB9AP2-201ENST00000443911 597 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AL589765.3-201ENST00000446084 462 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.05□□□□□ -1.6
CASP4P49662 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.05□□□□□ -1.6
CASP4P49662 OR9N1P-201ENST00000491296 333 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AL133372.1-201ENST00000493565 745 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AC231760.1-201ENST00000498002 260 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AC093890.1-201ENST00000502554 540 ntBASIC5.05□□□□□ -1.6
CASP4P49662 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.05□□□□□ -1.6
CASP4P49662 AP002981.1-201ENST00000517692 975 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.05□□□□□ -1.6
CASP4P49662 ADAM3B-201ENST00000569937 840 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AP005262.1-201ENST00000582646 997 ntBASIC5.05□□□□□ -1.6
CASP4P49662 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.05□□□□□ -1.6
CASP4P49662 AC004948.1-201ENST00000609858 672 ntBASIC5.05□□□□□ -1.6
CASP4P49662 MIR7703-201ENST00000620784 77 ntBASIC5.05□□□□□ -1.6
CASP4P49662 MIR6730-201ENST00000622213 67 ntBASIC5.05□□□□□ -1.6
CASP4P49662 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.05□□□□□ -1.6
CASP4P49662 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CASP4P49662 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.05□□□□□ -1.6
CASP4P49662 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CASP4P49662 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CASP4P49662 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CASP4P49662 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CASP4P49662 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.05□□□□□ -1.6
CASP4P49662 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CASP4P49662 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.04□□□□□ -1.6
CASP4P49662 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CASP4P49662 MIR137-201ENST00000385223 102 ntBASIC5.04□□□□□ -1.6
CASP4P49662 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.04□□□□□ -1.6
CASP4P49662 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.04□□□□□ -1.6
CASP4P49662 RN7SKP267-201ENST00000410381 285 ntBASIC5.04□□□□□ -1.6
CASP4P49662 SETP15-201ENST00000412724 337 ntBASIC5.04□□□□□ -1.6
CASP4P49662 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.04□□□□□ -1.6
CASP4P49662 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.04□□□□□ -1.6
CASP4P49662 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.04□□□□□ -1.6
CASP4P49662 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.04□□□□□ -1.6
CASP4P49662 AC006466.1-201ENST00000438721 289 ntBASIC5.04□□□□□ -1.6
CASP4P49662 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.04□□□□□ -1.6
CASP4P49662 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.04□□□□□ -1.6
CASP4P49662 CEACAMP6-201ENST00000452007 574 ntBASIC5.04□□□□□ -1.6
CASP4P49662 SCARNA10-201ENST00000459255 330 ntBASIC5.04□□□□□ -1.6
CASP4P49662 RPS4XP12-201ENST00000461747 709 ntBASIC5.04□□□□□ -1.6
CASP4P49662 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CASP4P49662 AC007016.1-201ENST00000512110 244 ntBASIC5.04□□□□□ -1.6
CASP4P49662 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.04□□□□□ -1.6
CASP4P49662 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.04□□□□□ -1.6
CASP4P49662 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms