Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 GAPDHP24-201ENST00000328713 983 ntBASIC4.87□□□□□ -1.63
SOX2P48431 RNU6-1339P-201ENST00000363574 91 ntBASIC4.87□□□□□ -1.63
SOX2P48431 SNORA62.2-201ENST00000364672 152 ntBASIC4.87□□□□□ -1.63
SOX2P48431 SNORD56.6-201ENST00000384569 71 ntBASIC4.87□□□□□ -1.63
SOX2P48431 MIR137-201ENST00000385223 102 ntBASIC4.87□□□□□ -1.63
SOX2P48431 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 RN7SKP222-201ENST00000410651 315 ntBASIC4.87□□□□□ -1.63
SOX2P48431 RAP1BP1-201ENST00000412709 553 ntBASIC4.87□□□□□ -1.63
SOX2P48431 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 TRGV6-201ENST00000417928 299 ntBASIC4.87□□□□□ -1.63
SOX2P48431 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 CDY14P-201ENST00000431260 1014 ntBASIC4.87□□□□□ -1.63
SOX2P48431 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 COX7BP2-201ENST00000437976 242 ntBASIC4.87□□□□□ -1.63
SOX2P48431 CDY12P-201ENST00000440679 1015 ntBASIC4.87□□□□□ -1.63
SOX2P48431 CDY13P-201ENST00000445813 1015 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 CDY23P-201ENST00000451661 1014 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 ANKRD26P4-201ENST00000455755 950 ntBASIC4.87□□□□□ -1.63
SOX2P48431 RNU7-27P-201ENST00000459281 62 ntBASIC4.87□□□□□ -1.63
SOX2P48431 RN7SL72P-201ENST00000460697 269 ntBASIC4.87□□□□□ -1.63
SOX2P48431 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 AC037198.2-201ENST00000478845 733 ntBASIC4.87□□□□□ -1.63
SOX2P48431 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 AC021678.3-201ENST00000517893 476 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 POLR2KP1-201ENST00000553226 168 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AADACP1-206ENST00000561502 1193 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.87□□□□□ -1.63
SOX2P48431 MIR4502-201ENST00000580432 81 ntBASIC4.87□□□□□ -1.63
SOX2P48431 MIR7853-201ENST00000584820 132 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC090236.2-201ENST00000587933 1101 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AL158042.1-201ENST00000605338 460 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC018638.7-201ENST00000605836 1114 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC099676.1-201ENST00000608886 657 ntBASIC4.87□□□□□ -1.63
SOX2P48431 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX2P48431 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 AC093225.1-201ENST00000506867 1408 ntBASIC4.87□□□□□ -1.63
SOX2P48431 AC006042.3-201ENST00000454684 1469 ntBASIC4.87□□□□□ -1.63
SOX2P48431 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX2P48431 AC006206.1-201ENST00000544842 3387 ntBASIC4.87□□□□□ -1.63
SOX2P48431 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SOX2P48431 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SOX2P48431 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SOX2P48431 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SOX2P48431 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 RNU6-98P-201ENST00000384173 107 ntBASIC4.86□□□□□ -1.63
SOX2P48431 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SOX2P48431 AL034417.1-201ENST00000399343 800 ntBASIC4.86□□□□□ -1.63
SOX2P48431 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX2P48431 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.86□□□□□ -1.63
SOX2P48431 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX2P48431 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 BX119904.4-201ENST00000424402 301 ntBASIC4.86□□□□□ -1.63
SOX2P48431 RIMKLBP2-201ENST00000424737 654 ntBASIC4.86□□□□□ -1.63
SOX2P48431 KCTD9P1-201ENST00000430462 1167 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 MTND4P32-201ENST00000437189 1237 ntBASIC4.86□□□□□ -1.63
SOX2P48431 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX2P48431 HMGB1P48-201ENST00000446155 598 ntBASIC4.86□□□□□ -1.63
SOX2P48431 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX2P48431 CFL1P4-201ENST00000451536 498 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms