Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SNORA11.3-201ENST00000408471 128 ntBASIC5.21□□□□□ -1.58
SSR1P43307 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.21□□□□□ -1.58
SSR1P43307 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.21□□□□□ -1.58
SSR1P43307 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.21□□□□□ -1.58
SSR1P43307 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.21□□□□□ -1.58
SSR1P43307 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.21□□□□□ -1.58
SSR1P43307 RPS29P9-201ENST00000440360 171 ntBASIC5.21□□□□□ -1.58
SSR1P43307 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SSR1P43307 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.21□□□□□ -1.58
SSR1P43307 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.21□□□□□ -1.58
SSR1P43307 CLIC4P1-201ENST00000453177 535 ntBASIC5.21□□□□□ -1.58
SSR1P43307 AL389915.2-201ENST00000454576 441 ntBASIC5.21□□□□□ -1.58
SSR1P43307 AP002371.1-201ENST00000463604 433 ntBASIC5.21□□□□□ -1.58
SSR1P43307 AC079841.1-201ENST00000481228 950 ntBASIC5.21□□□□□ -1.58
SSR1P43307 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.21□□□□□ -1.58
SSR1P43307 STMN1P2-201ENST00000508435 439 ntBASIC5.21□□□□□ -1.58
SSR1P43307 RNU2-30P-201ENST00000516209 141 ntBASIC5.21□□□□□ -1.58
SSR1P43307 BUD31P1-201ENST00000521828 359 ntBASIC5.21□□□□□ -1.58
SSR1P43307 OR4A46P-201ENST00000527255 933 ntBASIC5.21□□□□□ -1.58
SSR1P43307 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.21□□□□□ -1.58
SSR1P43307 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.21□□□□□ -1.58
SSR1P43307 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.21□□□□□ -1.58
SSR1P43307 MIR4489-201ENST00000578869 62 ntBASIC5.21□□□□□ -1.58
SSR1P43307 MIR1269B-201ENST00000580405 75 ntBASIC5.21□□□□□ -1.58
SSR1P43307 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.21□□□□□ -1.58
SSR1P43307 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.21□□□□□ -1.58
SSR1P43307 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.21□□□□□ -1.58
SSR1P43307 AL049794.2-201ENST00000616301 365 ntBASIC5.21□□□□□ -1.58
SSR1P43307 SNORA11.6-201ENST00000619030 128 ntBASIC5.21□□□□□ -1.58
SSR1P43307 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SSR1P43307 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSR1P43307 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SSR1P43307 AC017104.4-201ENST00000636283 1592 ntBASIC5.21□□□□□ -1.58
SSR1P43307 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.2□□□□□ -1.58
SSR1P43307 AC009951.1-201ENST00000623674 2614 ntBASIC5.2□□□□□ -1.58
SSR1P43307 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.2□□□□□ -1.58
SSR1P43307 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SSR1P43307 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SSR1P43307 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.2□□□□□ -1.58
SSR1P43307 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.2□□□□□ -1.58
SSR1P43307 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 AC092162.1-201ENST00000432828 434 ntBASIC5.2□□□□□ -1.58
SSR1P43307 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 SCAND3P1-201ENST00000439854 1060 ntBASIC5.2□□□□□ -1.58
SSR1P43307 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.2□□□□□ -1.58
SSR1P43307 AC112206.1-201ENST00000468416 477 ntBASIC5.2□□□□□ -1.58
SSR1P43307 AC097484.1-201ENST00000471148 389 ntBASIC5.2□□□□□ -1.58
SSR1P43307 AC090686.1-201ENST00000481577 749 ntBASIC5.2□□□□□ -1.58
SSR1P43307 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.2□□□□□ -1.58
SSR1P43307 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.2□□□□□ -1.58
SSR1P43307 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.2□□□□□ -1.58
SSR1P43307 RNA5SP303-201ENST00000516192 130 ntBASIC5.2□□□□□ -1.58
SSR1P43307 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.2□□□□□ -1.58
SSR1P43307 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.2□□□□□ -1.58
SSR1P43307 AC027308.1-201ENST00000517993 110 ntBASIC5.2□□□□□ -1.58
SSR1P43307 OR7E128P-201ENST00000532736 1024 ntBASIC5.2□□□□□ -1.58
SSR1P43307 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.2□□□□□ -1.58
SSR1P43307 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.2□□□□□ -1.58
SSR1P43307 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.2□□□□□ -1.58
SSR1P43307 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.2□□□□□ -1.58
SSR1P43307 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.2□□□□□ -1.58
SSR1P43307 AL137246.1-201ENST00000607072 977 ntBASIC5.2□□□□□ -1.58
SSR1P43307 MIR6768-201ENST00000610734 72 ntBASIC5.2□□□□□ -1.58
SSR1P43307 AC004241.3-201ENST00000611728 517 ntBASIC5.2□□□□□ -1.58
SSR1P43307 AC004808.2-201ENST00000627965 773 ntBASIC5.2□□□□□ -1.58
SSR1P43307 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.2□□□□□ -1.58
SSR1P43307 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 PABPC1P6-201ENST00000445594 1829 ntBASIC5.2□□□□□ -1.58
SSR1P43307 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 ECM1P2-201ENST00000503354 1577 ntBASIC5.2□□□□□ -1.58
SSR1P43307 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSR1P43307 DDX18P5-201ENST00000534547 1306 ntBASIC5.2□□□□□ -1.58
SSR1P43307 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.19□□□□□ -1.58
SSR1P43307 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSR1P43307 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SSR1P43307 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSR1P43307 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSR1P43307 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSR1P43307 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSR1P43307 MIR448-201ENST00000362131 111 ntBASIC5.19□□□□□ -1.58
SSR1P43307 RNU6-146P-201ENST00000384602 108 ntBASIC5.19□□□□□ -1.58
SSR1P43307 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSR1P43307 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSR1P43307 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSR1P43307 RPL6P29-201ENST00000414863 865 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.19□□□□□ -1.58
SSR1P43307 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.19□□□□□ -1.58
SSR1P43307 E2F6P2-201ENST00000420708 748 ntBASIC5.19□□□□□ -1.58
SSR1P43307 MTND2P2-201ENST00000434633 945 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.19□□□□□ -1.58
SSR1P43307 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.19□□□□□ -1.58
SSR1P43307 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.19□□□□□ -1.58
SSR1P43307 RPL34P20-201ENST00000442771 351 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms