Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
HOXC12P31275 QRSL1P1-201ENST00000400977 1540 ntBASIC5.88□□□□□ -1.47
HOXC12P31275 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC12P31275 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC12P31275 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC12P31275 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC12P31275 TMCC1P1-201ENST00000518897 1980 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 RPL12P13-201ENST00000310055 497 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 RNU6-348P-201ENST00000384386 107 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 RNU6-1122P-201ENST00000384449 107 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC12P31275 MTCYBP36-201ENST00000404146 440 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 RANP6-201ENST00000413691 644 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC12P31275 AL929472.1-201ENST00000417484 429 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 RPL30P16-201ENST00000419341 429 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 PSMD10P2-201ENST00000432890 672 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AL645939.3-201ENST00000435408 225 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 FMO7P-201ENST00000436045 768 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 AL831737.1-201ENST00000441288 271 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC004865.1-201ENST00000442276 1003 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AL512593.1-201ENST00000444758 779 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 HMGN1P2-201ENST00000445197 310 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 UBBP5-201ENST00000446970 266 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 NDUFA5P7-201ENST00000452914 242 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 RPL26P30-201ENST00000453533 435 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 RN7SL221P-201ENST00000466190 281 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 AC126182.1-201ENST00000478134 357 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 MTAPP1-201ENST00000489154 819 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 AC138853.1-201ENST00000503549 823 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 SNORA48.10-201ENST00000516965 160 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 AC008562.1-201ENST00000521763 330 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC087276.1-201ENST00000529659 480 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AP004609.2-201ENST00000532177 190 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 AC006512.2-201ENST00000543250 486 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 KPNA2P3-201ENST00000584190 848 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 AL606834.2-201ENST00000602954 668 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AL596327.1-201ENST00000603629 213 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC005084.1-201ENST00000605160 304 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC004241.2-201ENST00000614562 444 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC243756.2-201ENST00000618406 463 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 AC022400.9-201ENST00000623633 273 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AC120349.2-201ENST00000625002 298 ntBASIC5.87□□□□□ -1.47
HOXC12P31275 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC12P31275 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC12P31275 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXC12P31275 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC12P31275 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC12P31275 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC12P31275 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 AL590763.1-201ENST00000398297 1545 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms