Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RN7SL860P-201ENST00000473738 223 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AC104763.1-201ENST00000475274 360 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.94□□□□□ -1.78
COL8A2P25067 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.94□□□□□ -1.78
COL8A2P25067 RNA5SP249-201ENST00000516127 99 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 RNA5SP464-201ENST00000516251 108 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.94□□□□□ -1.78
COL8A2P25067 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.94□□□□□ -1.78
COL8A2P25067 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.94□□□□□ -1.78
COL8A2P25067 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.94□□□□□ -1.78
COL8A2P25067 CYCSP40-201ENST00000575927 294 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AC069061.3-201ENST00000582254 823 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 MIR4715-201ENST00000584117 79 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.94□□□□□ -1.78
COL8A2P25067 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.94□□□□□ -1.78
COL8A2P25067 AL139041.1-201ENST00000605480 610 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.94□□□□□ -1.78
COL8A2P25067 AC004232.3-201ENST00000622977 525 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 U3.53-201ENST00000628922 216 ntBASIC3.94□□□□□ -1.78
COL8A2P25067 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL8A2P25067 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
COL8A2P25067 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL8A2P25067 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.94□□□□□ -1.78
COL8A2P25067 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL8A2P25067 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A2P25067 BTBD10P1-201ENST00000549824 1352 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.93□□□□□ -1.78
COL8A2P25067 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A2P25067 AC126755.2-208ENST00000327792 462 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AC138969.1-213ENST00000331436 462 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL8A2P25067 U3.22-201ENST00000391120 215 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 RNA5SP397-201ENST00000391323 118 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.93□□□□□ -1.78
COL8A2P25067 GLUD1P9-201ENST00000420997 1173 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 RPEP3-201ENST00000425462 676 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 CNOT7P1-201ENST00000429006 852 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.93□□□□□ -1.78
COL8A2P25067 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AL591623.2-201ENST00000449978 222 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.93□□□□□ -1.78
COL8A2P25067 CYCSP42-201ENST00000450823 238 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 MTND2P28-201ENST00000457540 1044 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 ZFRP1-201ENST00000457579 2970 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.93□□□□□ -1.78
COL8A2P25067 AP000942.1-201ENST00000463969 747 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AC090142.1-201ENST00000465776 462 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 NDUFA5P9-201ENST00000472609 340 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 RNA5SP303-201ENST00000516192 130 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 C1GALT1P3-201ENST00000522049 819 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AP001781.1-201ENST00000530977 207 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.93□□□□□ -1.78
COL8A2P25067 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.93□□□□□ -1.78
COL8A2P25067 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.93□□□□□ -1.78
COL8A2P25067 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.93□□□□□ -1.78
COL8A2P25067 AC019193.2-201ENST00000610012 634 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AC015914.2-201ENST00000618167 288 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AC011815.3-201ENST00000624194 473 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 AL049536.1-201ENST00000625043 744 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.93□□□□□ -1.78
COL8A2P25067 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.93□□□□□ -1.78
COL8A2P25067 AC132825.8-201ENST00000640783 297 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.93□□□□□ -1.78
COL8A2P25067 TTC39DP-201ENST00000416781 1688 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.93□□□□□ -1.78
COL8A2P25067 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A2P25067 AC108467.2-201ENST00000617640 1597 ntBASIC3.93□□□□□ -1.78
COL8A2P25067 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL8A2P25067 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A2P25067 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
COL8A2P25067 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 ZNF137P-201ENST00000456718 1920 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL8A2P25067 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
COL8A2P25067 AC136624.1-201ENST00000400791 413 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 ARL4AP5-201ENST00000404372 599 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A2P25067 RPS27AP7-201ENST00000422792 455 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 EIF4HP2-201ENST00000424380 563 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.92□□□□□ -1.78
COL8A2P25067 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.92□□□□□ -1.78
COL8A2P25067 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.92□□□□□ -1.78
COL8A2P25067 AC135999.1-201ENST00000478962 479 ntBASIC3.92□□□□□ -1.78
COL8A2P25067 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.92□□□□□ -1.78
COL8A2P25067 MTND4LP2-201ENST00000502312 285 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms