Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 AP005432.1-201ENST00000580891 3485 ntBASIC4.9□□□□□ -1.63
TNFRSF1BP20333 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TNFRSF1BP20333 AC003985.2-201ENST00000562268 1669 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 THAP12P5-201ENST00000405864 2275 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 ZNF876P-202ENST00000398732 1485 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 RNU4-92P-201ENST00000363783 136 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 RNU4-2-201ENST00000365668 141 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 RNU6-31P-201ENST00000384388 108 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 SNORD116-12-201ENST00000384468 92 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AL136310.1-201ENST00000404926 654 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AL356131.1-201ENST00000405826 414 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC211486.3-201ENST00000412694 621 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 ART2BP-201ENST00000453501 499 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 RPS6P2-201ENST00000454208 705 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 ATG12P2-201ENST00000456830 416 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC011037.1-201ENST00000483964 558 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 RPS3AP22-201ENST00000488297 769 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 SNORA70.11-201ENST00000515987 138 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 SNORA70.13-201ENST00000516116 138 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 OR8I1P-201ENST00000529291 931 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC005363.1-201ENST00000530779 351 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 NANOGNBP2-201ENST00000544753 553 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 DUXAP6-201ENST00000553858 601 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 RBM22P1-201ENST00000578589 1214 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AL353778.1-201ENST00000603149 408 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AP002906.1-201ENST00000603405 233 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 Z98755.1-201ENST00000407015 1384 ntBASIC4.89□□□□□ -1.63
TNFRSF1BP20333 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TNFRSF1BP20333 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 AC023421.1-201ENST00000590535 1785 ntBASIC4.88□□□□□ -1.63
TNFRSF1BP20333 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 ZNF849P-201ENST00000594711 1566 ntBASIC4.88□□□□□ -1.63
TNFRSF1BP20333 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 AL731532.2-201ENST00000623542 1953 ntBASIC4.88□□□□□ -1.63
TNFRSF1BP20333 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TNFRSF1BP20333 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms