Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MIR4436B2-201ENST00000581415 91 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 MIR4436B1-201ENST00000583272 91 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AL353662.3-201ENST00000625131 237 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PDGFRAP16234 OR5AC4P-202ENST00000642086 985 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFRAP16234 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PDGFRAP16234 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDGFRAP16234 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFRAP16234 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFRAP16234 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PDGFRAP16234 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFRAP16234 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFRAP16234 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFRAP16234 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFRAP16234 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AL078599.1-201ENST00000402075 293 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 AL512430.2-201ENST00000406786 339 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AL590609.2-201ENST00000421430 368 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 OR6K4P-201ENST00000423179 955 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 RPS26P4-201ENST00000431743 355 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFRAP16234 VN1R54P-201ENST00000435210 1049 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 AL157827.1-201ENST00000447622 132 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 TRY2P-201ENST00000448860 689 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFRAP16234 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC098799.1-201ENST00000504752 800 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFRAP16234 OR5AZ1P-201ENST00000527448 943 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC104687.2-201ENST00000604442 342 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC091905.4-201ENST00000623432 202 ntBASIC5.19□□□□□ -1.58
PDGFRAP16234 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFRAP16234 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFRAP16234 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFRAP16234 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 AC007996.1-201ENST00000620414 2821 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 INTS6P1-201ENST00000504674 2530 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDGFRAP16234 SNORA51.8-201ENST00000384234 132 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 RNU6-178P-201ENST00000384631 104 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 MIR550A3-201ENST00000390735 95 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFRAP16234 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFRAP16234 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFRAP16234 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFRAP16234 SUMO2P1-206ENST00000445436 284 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 AL035551.1-201ENST00000446931 348 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
PDGFRAP16234 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFRAP16234 AL645937.3-201ENST00000453647 936 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 RPL10P17-201ENST00000453852 316 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFRAP16234 NPM1P29-201ENST00000483112 803 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.18□□□□□ -1.58
PDGFRAP16234 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFRAP16234 RNA5SP228-201ENST00000516232 133 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFRAP16234 TVP23CP2-201ENST00000571473 623 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFRAP16234 MEMO1P5-201ENST00000604810 406 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 AC019206.1-201ENST00000621938 425 ntBASIC5.18□□□□□ -1.58
PDGFRAP16234 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms