Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.11□□□□□ -1.59
COL11A1P12107 SNRPCP3-201ENST00000474888 476 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RPS27AP16-201ENST00000492222 470 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RN7SL810P-201ENST00000493031 276 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.11□□□□□ -1.59
COL11A1P12107 AL359219.2-201ENST00000555184 348 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.11□□□□□ -1.59
COL11A1P12107 AC093227.2-201ENST00000589357 285 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 AC113403.1-201ENST00000604910 193 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.11□□□□□ -1.59
COL11A1P12107 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
COL11A1P12107 LARP1BP1-201ENST00000506036 1359 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.11□□□□□ -1.59
COL11A1P12107 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.11□□□□□ -1.59
COL11A1P12107 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.11□□□□□ -1.59
COL11A1P12107 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
COL11A1P12107 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.11□□□□□ -1.59
COL11A1P12107 AL121657.1-201ENST00000327215 531 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RNU1-85P-201ENST00000364127 164 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RNA5SP151-201ENST00000365632 117 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.11□□□□□ -1.59
COL11A1P12107 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.11□□□□□ -1.59
COL11A1P12107 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.11□□□□□ -1.59
COL11A1P12107 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.11□□□□□ -1.59
COL11A1P12107 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.11□□□□□ -1.59
COL11A1P12107 NUTF2P3-201ENST00000448540 384 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 AC010547.7-201ENST00000570323 333 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL11A1P12107 CCDC58P3-201ENST00000590792 430 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 RPL7P50-201ENST00000600588 727 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.11□□□□□ -1.59
COL11A1P12107 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.11□□□□□ -1.59
COL11A1P12107 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.11□□□□□ -1.59
COL11A1P12107 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL11A1P12107 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
COL11A1P12107 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.1□□□□□ -1.59
COL11A1P12107 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.1□□□□□ -1.59
COL11A1P12107 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 RNU1-94P-201ENST00000362627 173 ntBASIC5.1□□□□□ -1.59
COL11A1P12107 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
COL11A1P12107 MIR3065-201ENST00000390137 79 ntBASIC5.1□□□□□ -1.59
COL11A1P12107 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.1□□□□□ -1.59
COL11A1P12107 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
COL11A1P12107 RNA5SP230-201ENST00000517039 122 ntBASIC5.1□□□□□ -1.59
COL11A1P12107 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.1□□□□□ -1.59
COL11A1P12107 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.1□□□□□ -1.59
COL11A1P12107 RN7SL703P-201ENST00000578485 302 ntBASIC5.1□□□□□ -1.59
COL11A1P12107 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
COL11A1P12107 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL11A1P12107 EIF2AP4-201ENST00000424793 1781 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 AL157831.1-201ENST00000426134 473 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 AL132765.1-201ENST00000434165 553 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.09□□□□□ -1.59
COL11A1P12107 AC090602.1-201ENST00000469695 252 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 SLC25A15P5-201ENST00000508033 253 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL11A1P12107 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.09□□□□□ -1.59
COL11A1P12107 AC011477.5-201ENST00000586571 259 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
COL11A1P12107 uc_338.13-201ENST00000618243 179 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL11A1P12107 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL11A1P12107 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL11A1P12107 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL11A1P12107 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.09□□□□□ -1.59
COL11A1P12107 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL11A1P12107 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL11A1P12107 AL355852.1-201ENST00000454081 1771 ntBASIC5.09□□□□□ -1.59
COL11A1P12107 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL11A1P12107 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL11A1P12107 IQCB2P-201ENST00000401788 1633 ntBASIC5.09□□□□□ -1.6
COL11A1P12107 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.09□□□□□ -1.6
COL11A1P12107 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
COL11A1P12107 EIF4A1P3-201ENST00000411521 244 ntBASIC5.09□□□□□ -1.6
COL11A1P12107 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL11A1P12107 TRGV7-201ENST00000427089 353 ntBASIC5.09□□□□□ -1.6
COL11A1P12107 AC122718.1-201ENST00000439448 744 ntBASIC5.09□□□□□ -1.6
COL11A1P12107 AC114495.1-201ENST00000441274 436 ntBASIC5.09□□□□□ -1.6
COL11A1P12107 AC012671.1-201ENST00000451912 203 ntBASIC5.09□□□□□ -1.6
COL11A1P12107 FAM133DP-201ENST00000464802 691 ntBASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms