Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC140479.3-201ENST00000418944 1126 ntBASIC4.15□□□□□ -1.74
FREM3P0C091 RPL36AP10-201ENST00000421785 322 ntBASIC4.15□□□□□ -1.74
FREM3P0C091 GSTA7P-201ENST00000438425 448 ntBASIC4.15□□□□□ -1.74
FREM3P0C091 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.15□□□□□ -1.74
FREM3P0C091 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.15□□□□□ -1.74
FREM3P0C091 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
FREM3P0C091 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.15□□□□□ -1.74
FREM3P0C091 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.15□□□□□ -1.74
FREM3P0C091 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.15□□□□□ -1.74
FREM3P0C091 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.15□□□□□ -1.74
FREM3P0C091 AC020915.5-201ENST00000596836 964 ntBASIC4.15□□□□□ -1.74
FREM3P0C091 OR52H1-202ENST00000641796 1061 ntBASIC4.15□□□□□ -1.74
FREM3P0C091 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FREM3P0C091 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.15□□□□□ -1.75
FREM3P0C091 AC107068.1-201ENST00000563286 4218 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 TCP1P3-201ENST00000414406 1498 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
FREM3P0C091 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FREM3P0C091 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FREM3P0C091 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.15□□□□□ -1.75
FREM3P0C091 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 ISCUP1-201ENST00000454451 448 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.15□□□□□ -1.75
FREM3P0C091 RPL7AP10-201ENST00000481016 791 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 AC026979.1-201ENST00000492525 396 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.15□□□□□ -1.75
FREM3P0C091 AC068831.4-201ENST00000556118 109 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 RN7SL435P-201ENST00000584418 282 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.15□□□□□ -1.75
FREM3P0C091 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FREM3P0C091 AC073091.2-201ENST00000603205 907 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 AC019193.2-201ENST00000610012 634 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 AC083809.1-201ENST00000615051 472 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 MLECP1-201ENST00000615893 709 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
FREM3P0C091 AL031119.1-201ENST00000404707 1879 ntBASIC4.15□□□□□ -1.75
FREM3P0C091 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
FREM3P0C091 VN2R3P-201ENST00000422626 1412 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 AC120338.1-201ENST00000625074 1541 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.14□□□□□ -1.75
FREM3P0C091 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.14□□□□□ -1.75
FREM3P0C091 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FREM3P0C091 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FREM3P0C091 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FREM3P0C091 MIR383-201ENST00000362257 73 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
FREM3P0C091 RPL21P91-201ENST00000429231 479 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 NMNAT1P2-201ENST00000435192 860 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.14□□□□□ -1.75
FREM3P0C091 RPL21P133-201ENST00000443666 476 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.14□□□□□ -1.75
FREM3P0C091 AC109327.1-201ENST00000471666 403 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 NIP7P2-201ENST00000485801 544 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 RPL36AP41-201ENST00000493820 306 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.14□□□□□ -1.75
FREM3P0C091 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.14□□□□□ -1.75
FREM3P0C091 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.14□□□□□ -1.75
FREM3P0C091 AP001781.1-201ENST00000530977 207 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.14□□□□□ -1.75
FREM3P0C091 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.14□□□□□ -1.75
FREM3P0C091 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.14□□□□□ -1.75
FREM3P0C091 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.14□□□□□ -1.75
FREM3P0C091 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.14□□□□□ -1.75
FREM3P0C091 AC063952.1-203ENST00000634410 658 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 AC023632.6-201ENST00000624338 2177 ntBASIC4.14□□□□□ -1.75
FREM3P0C091 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
FREM3P0C091 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.14□□□□□ -1.75
FREM3P0C091 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.14□□□□□ -1.75
FREM3P0C091 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FREM3P0C091 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FREM3P0C091 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.13□□□□□ -1.75
FREM3P0C091 RNA5SP397-201ENST00000391323 118 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.13□□□□□ -1.75
FREM3P0C091 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.13□□□□□ -1.75
FREM3P0C091 AC023141.6-201ENST00000429418 337 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 RPEP2-201ENST00000432149 701 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.13□□□□□ -1.75
FREM3P0C091 MRPL48P1-201ENST00000445390 636 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 MTND2P28-201ENST00000457540 1044 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AC093840.1-201ENST00000511599 336 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.13□□□□□ -1.75
FREM3P0C091 RNA5SP446-201ENST00000515955 82 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.13□□□□□ -1.75
FREM3P0C091 MIR3939-201ENST00000582614 106 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AC125494.2-201ENST00000602431 657 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.13□□□□□ -1.75
FREM3P0C091 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.13□□□□□ -1.75
FREM3P0C091 AL133268.1-201ENST00000405676 1401 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
FREM3P0C091 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FREM3P0C091 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
FREM3P0C091 RNA5SP447-201ENST00000363749 119 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 RNU1-13P-201ENST00000384499 162 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 RNU4-25P-201ENST00000410569 230 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 UQCRBP1-201ENST00000421129 336 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 RPS29P17-201ENST00000430795 166 ntBASIC4.13□□□□□ -1.75
FREM3P0C091 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.13□□□□□ -1.75
FREM3P0C091 AC004938.1-201ENST00000438468 308 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms