Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC015911.5-201ENST00000587076 451 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.57□□□□□ -1.84
CXCL1P09341 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.57□□□□□ -1.84
CXCL1P09341 RNA5SP440-201ENST00000612665 119 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.57□□□□□ -1.84
CXCL1P09341 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CXCL1P09341 AC103858.2-201ENST00000621471 543 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 AC087821.1-201ENST00000623639 567 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.57□□□□□ -1.84
CXCL1P09341 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 CASC19-281ENST00000642118 1554 ntBASIC3.57□□□□□ -1.84
CXCL1P09341 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CXCL1P09341 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.57□□□□□ -1.84
CXCL1P09341 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CXCL1P09341 RNU1-44P-201ENST00000384453 163 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AL357515.1-201ENST00000402967 542 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CXCL1P09341 MORN2-202ENST00000409077 465 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 RNA5SP345-201ENST00000410646 108 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL1P09341 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.56□□□□□ -1.84
CXCL1P09341 RPL7P4-203ENST00000430239 730 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 RPL7P28-201ENST00000437739 740 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 AL163193.1-201ENST00000444895 788 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.56□□□□□ -1.84
CXCL1P09341 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 MTND2P25-201ENST00000449028 610 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC094085.1-201ENST00000468914 584 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 RN7SL222P-201ENST00000476452 299 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 RN7SL809P-201ENST00000482040 297 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AC116562.1-201ENST00000485355 781 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 NDUFB4P12-201ENST00000513465 390 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 RN7SKP34-201ENST00000516142 244 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AC022826.1-201ENST00000519383 805 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC112191.2-201ENST00000522428 333 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL1P09341 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.56□□□□□ -1.84
CXCL1P09341 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 AL049779.2-201ENST00000553847 315 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC093249.4-201ENST00000564755 259 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC091178.1-203ENST00000584586 279 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC010424.2-201ENST00000607594 443 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AL159169.2-201ENST00000610061 1269 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.56□□□□□ -1.84
CXCL1P09341 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 AP002967.1-201ENST00000624203 539 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 CR381572.2-201ENST00000624852 397 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CXCL1P09341 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL1P09341 USP9YP4-201ENST00000424401 1745 ntBASIC3.56□□□□□ -1.84
CXCL1P09341 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CXCL1P09341 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 NXF4-202ENST00000416098 1465 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.55□□□□□ -1.84
CXCL1P09341 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.55□□□□□ -1.84
CXCL1P09341 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL1P09341 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 RN7SKP269-201ENST00000365545 319 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CXCL1P09341 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.55□□□□□ -1.84
CXCL1P09341 AC092647.1-201ENST00000420654 287 ntBASIC3.55□□□□□ -1.84
CXCL1P09341 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL1P09341 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms