Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.17□□□□□ -1.58
APOA4P06727 IMMP1LP3-201ENST00000604197 224 ntBASIC5.17□□□□□ -1.58
APOA4P06727 KATNBL1P5-201ENST00000605015 517 ntBASIC5.17□□□□□ -1.58
APOA4P06727 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
APOA4P06727 AC123768.4-201ENST00000616244 701 ntBASIC5.17□□□□□ -1.58
APOA4P06727 AC118658.2-201ENST00000618697 459 ntBASIC5.17□□□□□ -1.58
APOA4P06727 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.17□□□□□ -1.58
APOA4P06727 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.17□□□□□ -1.58
APOA4P06727 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.17□□□□□ -1.58
APOA4P06727 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
APOA4P06727 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.17□□□□□ -1.58
APOA4P06727 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
APOA4P06727 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
APOA4P06727 NEAT1-202ENST00000501122 22743 ntBASIC5.17□□□□□ -1.58
APOA4P06727 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
APOA4P06727 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.17□□□□□ -1.58
APOA4P06727 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
APOA4P06727 AC114546.3-201ENST00000623582 1734 ntBASIC5.17□□□□□ -1.58
APOA4P06727 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
APOA4P06727 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
APOA4P06727 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
APOA4P06727 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 MAPK10-320ENST00000641462 6696 ntBASIC5.16□□□□□ -1.58
APOA4P06727 DDX18P3-201ENST00000404856 2007 ntBASIC5.16□□□□□ -1.58
APOA4P06727 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 AC092642.1-201ENST00000392417 425 ntBASIC5.16□□□□□ -1.58
APOA4P06727 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 HMGB1P13-201ENST00000406019 642 ntBASIC5.16□□□□□ -1.58
APOA4P06727 RN7SKP16-201ENST00000410180 299 ntBASIC5.16□□□□□ -1.58
APOA4P06727 RPL35AP24-201ENST00000413846 330 ntBASIC5.16□□□□□ -1.58
APOA4P06727 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.16□□□□□ -1.58
APOA4P06727 AL357078.2-201ENST00000416486 427 ntBASIC5.16□□□□□ -1.58
APOA4P06727 LINC01347-201ENST00000417964 355 ntBASIC5.16□□□□□ -1.58
APOA4P06727 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 AC108075.1-201ENST00000424692 529 ntBASIC5.16□□□□□ -1.58
APOA4P06727 RPL12P28-201ENST00000430852 489 ntBASIC5.16□□□□□ -1.58
APOA4P06727 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.16□□□□□ -1.58
APOA4P06727 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.16□□□□□ -1.58
APOA4P06727 RPS29P10-201ENST00000439197 166 ntBASIC5.16□□□□□ -1.58
APOA4P06727 AC239809.1-201ENST00000450470 217 ntBASIC5.16□□□□□ -1.58
APOA4P06727 AL606490.1-201ENST00000452266 765 ntBASIC5.16□□□□□ -1.58
APOA4P06727 Z92846.1-201ENST00000456203 268 ntBASIC5.16□□□□□ -1.58
APOA4P06727 AC011225.1-201ENST00000457751 369 ntBASIC5.16□□□□□ -1.58
APOA4P06727 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.16□□□□□ -1.58
APOA4P06727 UBA52P3-201ENST00000491303 382 ntBASIC5.16□□□□□ -1.58
APOA4P06727 RN7SL591P-201ENST00000496150 292 ntBASIC5.16□□□□□ -1.58
APOA4P06727 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 RPS4XP20-201ENST00000505751 772 ntBASIC5.16□□□□□ -1.58
APOA4P06727 GTF2F2P1-201ENST00000511083 675 ntBASIC5.16□□□□□ -1.58
APOA4P06727 MTND2P31-201ENST00000512602 616 ntBASIC5.16□□□□□ -1.58
APOA4P06727 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.16□□□□□ -1.58
APOA4P06727 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 AC004825.1-201ENST00000555068 586 ntBASIC5.16□□□□□ -1.58
APOA4P06727 AC025918.2-201ENST00000558683 763 ntBASIC5.16□□□□□ -1.58
APOA4P06727 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.16□□□□□ -1.58
APOA4P06727 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.16□□□□□ -1.58
APOA4P06727 AC100847.1-201ENST00000611316 481 ntBASIC5.16□□□□□ -1.58
APOA4P06727 AC108359.1-201ENST00000616451 1211 ntBASIC5.16□□□□□ -1.58
APOA4P06727 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 AC008115.4-201ENST00000619780 775 ntBASIC5.16□□□□□ -1.58
APOA4P06727 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 AC135068.12-201ENST00000637370 931 ntBASIC5.16□□□□□ -1.58
APOA4P06727 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 OR2L1P-202ENST00000641567 1023 ntBASIC5.16□□□□□ -1.58
APOA4P06727 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.16□□□□□ -1.58
APOA4P06727 RNF6P1-201ENST00000444889 1784 ntBASIC5.16□□□□□ -1.58
APOA4P06727 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.16□□□□□ -1.58
APOA4P06727 AL118496.1-201ENST00000440201 1812 ntBASIC5.16□□□□□ -1.58
APOA4P06727 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.16□□□□□ -1.58
APOA4P06727 AC104260.2-201ENST00000623551 3497 ntBASIC5.16□□□□□ -1.58
APOA4P06727 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
APOA4P06727 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
APOA4P06727 AC025574.1-201ENST00000554784 1653 ntBASIC5.15□□□□□ -1.58
APOA4P06727 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
APOA4P06727 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.15□□□□□ -1.58
APOA4P06727 AC000374.1-201ENST00000434698 1745 ntBASIC5.15□□□□□ -1.58
APOA4P06727 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.15□□□□□ -1.58
APOA4P06727 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
APOA4P06727 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
APOA4P06727 THAP12P5-201ENST00000405864 2275 ntBASIC5.15□□□□□ -1.58
APOA4P06727 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms