Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 AC109446.4-201ENST00000623235 2755 ntBASIC2.75□□□□□ -1.97
APOBP04114 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 UQCRC2P1-201ENST00000417777 1332 ntBASIC2.75□□□□□ -1.97
APOBP04114 UG0898H09-202ENST00000623646 7040 ntBASIC2.75□□□□□ -1.97
APOBP04114 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 RPL6P29-201ENST00000414863 865 ntBASIC2.75□□□□□ -1.97
APOBP04114 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC2.75□□□□□ -1.97
APOBP04114 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 AC099522.1-202ENST00000514718 367 ntBASIC2.75□□□□□ -1.97
APOBP04114 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 AC010201.1-201ENST00000605051 540 ntBASIC2.75□□□□□ -1.97
APOBP04114 AL137843.1-201ENST00000605078 385 ntBASIC2.75□□□□□ -1.97
APOBP04114 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
APOBP04114 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
APOBP04114 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
APOBP04114 MFSD13B-201ENST00000420133 1290 ntBASIC2.75□□□□□ -1.97
APOBP04114 AL162151.2-201ENST00000448875 158 ntBASIC2.75□□□□□ -1.97
APOBP04114 RPL23AP53-201ENST00000521854 457 ntBASIC2.75□□□□□ -1.97
APOBP04114 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC2.75□□□□□ -1.97
APOBP04114 AC023762.1-201ENST00000603280 584 ntBASIC2.75□□□□□ -1.97
APOBP04114 AC024023.1-201ENST00000624530 922 ntBASIC2.75□□□□□ -1.97
APOBP04114 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
APOBP04114 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.74□□□□□ -1.97
APOBP04114 RPL21P43-201ENST00000425440 472 ntBASIC2.74□□□□□ -1.97
APOBP04114 AL157831.1-201ENST00000426134 473 ntBASIC2.74□□□□□ -1.97
APOBP04114 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC2.74□□□□□ -1.97
APOBP04114 AL935212.3-201ENST00000450729 284 ntBASIC2.74□□□□□ -1.97
APOBP04114 KCTD9P2-201ENST00000512203 1013 ntBASIC2.74□□□□□ -1.97
APOBP04114 DUX4L52-201ENST00000549363 777 ntBASIC2.74□□□□□ -1.97
APOBP04114 AC005255.1-201ENST00000593748 216 ntBASIC2.74□□□□□ -1.97
APOBP04114 AC015804.1-201ENST00000622935 435 ntBASIC2.74□□□□□ -1.97
APOBP04114 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
APOBP04114 SYF2P2-201ENST00000417620 583 ntBASIC2.74□□□□□ -1.97
APOBP04114 COX6B1P7-201ENST00000430845 235 ntBASIC2.74□□□□□ -1.97
APOBP04114 AC138761.5-201ENST00000433967 325 ntBASIC2.74□□□□□ -1.97
APOBP04114 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC2.74□□□□□ -1.97
APOBP04114 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 ENSA-211ENST00000503345 793 ntTSL 3 BASIC2.74□□□□□ -1.97
APOBP04114 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 AC087477.6-201ENST00000559595 843 ntBASIC2.74□□□□□ -1.97
APOBP04114 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.74□□□□□ -1.97
APOBP04114 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 AL445487.1-201ENST00000415694 1580 ntBASIC2.74□□□□□ -1.97
APOBP04114 AL669831.5-218ENST00000591702 1873 ntBASIC2.74□□□□□ -1.97
APOBP04114 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 ARHGAP42P1-201ENST00000507474 1976 ntBASIC2.74□□□□□ -1.97
APOBP04114 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC2.74□□□□□ -1.97
APOBP04114 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
APOBP04114 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 Y_RNA.111-201ENST00000363248 100 ntBASIC2.74□□□□□ -1.97
APOBP04114 AL590704.1-201ENST00000402856 794 ntBASIC2.74□□□□□ -1.97
APOBP04114 AC011933.1-201ENST00000413334 321 ntBASIC2.74□□□□□ -1.97
APOBP04114 AC114495.1-201ENST00000441274 436 ntBASIC2.74□□□□□ -1.97
APOBP04114 AC116533.1-201ENST00000459748 321 ntBASIC2.74□□□□□ -1.97
APOBP04114 RN7SL323P-201ENST00000494712 295 ntBASIC2.74□□□□□ -1.97
APOBP04114 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC2.74□□□□□ -1.97
APOBP04114 AL451086.1-201ENST00000605596 223 ntBASIC2.74□□□□□ -1.97
APOBP04114 TTC3P1-201ENST00000399586 6081 ntBASIC2.74□□□□□ -1.97
APOBP04114 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
APOBP04114 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 BOLA3P4-201ENST00000418151 400 ntBASIC2.73□□□□□ -1.97
APOBP04114 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.73□□□□□ -1.97
APOBP04114 TBCAP1-201ENST00000436520 327 ntBASIC2.73□□□□□ -1.97
APOBP04114 UBE2DNL-203ENST00000474922 222 ntBASIC2.73□□□□□ -1.97
APOBP04114 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 AC111000.6-201ENST00000514471 709 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms