Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AP001273.1-201ENST00000624493 3152 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AL034370.1-201ENST00000397254 1590 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MT-ND1P03886 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MT-ND1P03886 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AP000756.2-201ENST00000624168 2567 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
MT-ND1P03886 U3.2-201ENST00000362981 210 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 RN7SKP160-201ENST00000363804 340 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 RNU1-43P-201ENST00000365052 165 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 BMS1P3-201ENST00000372011 932 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 U3.35-201ENST00000408405 208 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.57□□□□□ -1.68
MT-ND1P03886 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AC099336.2-201ENST00000422457 254 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 RPS27P18-201ENST00000431701 247 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 CFL1P1-202ENST00000432948 411 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 ZFAND6P1-201ENST00000434138 605 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC004938.1-201ENST00000438468 308 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC099560.2-201ENST00000457554 255 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 RN7SL515P-201ENST00000463999 297 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC025181.1-201ENST00000477507 416 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 RWDD4P1-201ENST00000488019 565 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 RPL37AP8-201ENST00000494116 276 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AC093890.1-201ENST00000502554 540 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 ARL4AP1-201ENST00000503220 705 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC021146.7-201ENST00000509604 775 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.57□□□□□ -1.68
MT-ND1P03886 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC125612.1-201ENST00000547580 377 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MT-ND1P03886 EIF1P5-201ENST00000585002 234 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AP004372.1-201ENST00000604842 844 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AC073111.2-201ENST00000605657 1075 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AC084036.1-201ENST00000609190 508 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 uc_338.18-201ENST00000615451 175 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AL049794.2-201ENST00000616301 365 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 AC103798.2-201ENST00000624292 632 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AL049767.1-202ENST00000637826 242 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC119674.1-220ENST00000641502 1048 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.57□□□□□ -1.68
MT-ND1P03886 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MT-ND1P03886 AC092435.4-201ENST00000623012 4159 ntBASIC4.57□□□□□ -1.68
MT-ND1P03886 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
MT-ND1P03886 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
MT-ND1P03886 RN7SKP224-201ENST00000364140 325 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 DUTP5-201ENST00000406790 469 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.56□□□□□ -1.68
MT-ND1P03886 RN7SKP222-201ENST00000410651 315 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.56□□□□□ -1.68
MT-ND1P03886 RPL35AP24-201ENST00000413846 330 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 NPM1P4-201ENST00000414095 812 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 OR52B5P-201ENST00000435337 951 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.56□□□□□ -1.68
MT-ND1P03886 KNOP1P3-201ENST00000446933 426 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AL354714.3-201ENST00000447284 493 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 OTX2P1-201ENST00000450956 354 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 PSMC1P13-201ENST00000458195 985 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.56□□□□□ -1.68
MT-ND1P03886 RPL21P6-201ENST00000479171 504 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.56□□□□□ -1.68
MT-ND1P03886 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.56□□□□□ -1.68
MT-ND1P03886 AC024558.1-201ENST00000505008 528 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 RNU6-491P-201ENST00000516099 110 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 HMGB1P19-201ENST00000517578 577 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.56□□□□□ -1.68
MT-ND1P03886 IGKV2-18-201ENST00000522607 343 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.56□□□□□ -1.68
MT-ND1P03886 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.56□□□□□ -1.68
MT-ND1P03886 AC012414.2-201ENST00000559474 187 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.56□□□□□ -1.68
MT-ND1P03886 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.56□□□□□ -1.68
MT-ND1P03886 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms