Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AC011815.3-201ENST00000624194 473 ntBASIC4.47□□□□□ -1.69
CTNSO60931 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
CTNSO60931 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNSO60931 AL442639.1-201ENST00000625030 1899 ntBASIC4.47□□□□□ -1.69
CTNSO60931 AL450326.2-201ENST00000421913 1962 ntBASIC4.47□□□□□ -1.69
CTNSO60931 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNSO60931 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTNSO60931 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTNSO60931 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CTNSO60931 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CTNSO60931 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
CTNSO60931 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CTNSO60931 DHX9P1-201ENST00000436565 3076 ntBASIC4.46□□□□□ -1.7
CTNSO60931 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.46□□□□□ -1.7
CTNSO60931 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.46□□□□□ -1.7
CTNSO60931 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.46□□□□□ -1.7
CTNSO60931 OR52B1P-201ENST00000316506 909 ntBASIC4.46□□□□□ -1.7
CTNSO60931 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNSO60931 AL360081.1-201ENST00000428299 555 ntBASIC4.46□□□□□ -1.7
CTNSO60931 AL049745.1-201ENST00000433953 286 ntBASIC4.46□□□□□ -1.7
CTNSO60931 CYCSP11-201ENST00000436426 315 ntBASIC4.46□□□□□ -1.7
CTNSO60931 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNSO60931 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNSO60931 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNSO60931 AC011005.3-201ENST00000491624 395 ntBASIC4.46□□□□□ -1.7
CTNSO60931 AC113430.1-201ENST00000506872 718 ntBASIC4.46□□□□□ -1.7
CTNSO60931 OR7H2P-201ENST00000513483 306 ntBASIC4.46□□□□□ -1.7
CTNSO60931 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNSO60931 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.46□□□□□ -1.7
CTNSO60931 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.46□□□□□ -1.7
CTNSO60931 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.46□□□□□ -1.7
CTNSO60931 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.46□□□□□ -1.7
CTNSO60931 AC234775.3-201ENST00000564612 656 ntBASIC4.46□□□□□ -1.7
CTNSO60931 AC233280.2-201ENST00000603917 1070 ntBASIC4.46□□□□□ -1.7
CTNSO60931 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.46□□□□□ -1.7
CTNSO60931 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.46□□□□□ -1.7
CTNSO60931 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTNSO60931 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.46□□□□□ -1.7
CTNSO60931 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTNSO60931 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CTNSO60931 AC005332.5-201ENST00000591222 2919 ntBASIC4.45□□□□□ -1.7
CTNSO60931 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CTNSO60931 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.45□□□□□ -1.7
CTNSO60931 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.45□□□□□ -1.7
CTNSO60931 CUL4AP1-201ENST00000514750 1863 ntBASIC4.45□□□□□ -1.7
CTNSO60931 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNSO60931 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNSO60931 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTNSO60931 RNU1-82P-201ENST00000390851 165 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AL590762.2-201ENST00000395798 571 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AL591848.1-201ENST00000413092 322 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNSO60931 GLUD1P9-201ENST00000420997 1173 ntBASIC4.45□□□□□ -1.7
CTNSO60931 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.45□□□□□ -1.7
CTNSO60931 NMNAT1P2-201ENST00000435192 860 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AC016831.4-201ENST00000438302 307 ntBASIC4.45□□□□□ -1.7
CTNSO60931 SNRPFP2-201ENST00000440710 251 ntBASIC4.45□□□□□ -1.7
CTNSO60931 PTMAP3-201ENST00000447474 330 ntBASIC4.45□□□□□ -1.7
CTNSO60931 RHEBP2-201ENST00000450289 600 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AC016687.1-201ENST00000482574 353 ntBASIC4.45□□□□□ -1.7
CTNSO60931 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.45□□□□□ -1.7
CTNSO60931 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.45□□□□□ -1.7
CTNSO60931 BTG4P1-201ENST00000510421 183 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.45□□□□□ -1.7
CTNSO60931 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.45□□□□□ -1.7
CTNSO60931 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.45□□□□□ -1.7
CTNSO60931 AC125612.1-201ENST00000547580 377 ntBASIC4.45□□□□□ -1.7
CTNSO60931 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNSO60931 RN7SL652P-201ENST00000577769 300 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AC008536.1-201ENST00000602872 669 ntBASIC4.45□□□□□ -1.7
CTNSO60931 Mico1.1-201ENST00000611698 204 ntBASIC4.45□□□□□ -1.7
CTNSO60931 LINC00901.1-201ENST00000617252 152 ntBASIC4.45□□□□□ -1.7
CTNSO60931 MIR6853-201ENST00000619642 74 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AP002967.1-201ENST00000624203 539 ntBASIC4.45□□□□□ -1.7
CTNSO60931 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.45□□□□□ -1.7
CTNSO60931 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTNSO60931 AC126323.6-202ENST00000568092 3511 ntBASIC4.45□□□□□ -1.7
CTNSO60931 AL445487.1-201ENST00000415694 1580 ntBASIC4.44□□□□□ -1.7
CTNSO60931 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNSO60931 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNSO60931 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.44□□□□□ -1.7
CTNSO60931 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNSO60931 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTNSO60931 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms