Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RANP1-206ENST00000455094 651 ntBASIC4.76□□□□□ -1.65
SNX3O60493 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 AC010469.1-201ENST00000463864 576 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AL133445.1-201ENST00000467051 452 ntBASIC4.76□□□□□ -1.65
SNX3O60493 RPS26P28-201ENST00000470806 348 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AC010350.1-201ENST00000504908 231 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 RNA5SP271-201ENST00000516700 88 ntBASIC4.76□□□□□ -1.65
SNX3O60493 VTA1P2-201ENST00000520205 911 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 AC079600.1-201ENST00000550326 297 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 AL358913.1-201ENST00000554342 121 ntBASIC4.76□□□□□ -1.65
SNX3O60493 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX3O60493 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX3O60493 AC005377.1-201ENST00000605126 456 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AC073137.1-201ENST00000605636 634 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AC005014.3-201ENST00000605985 190 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 AC103798.2-201ENST00000624292 632 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AP001052.1-201ENST00000626421 99 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 AC008758.3-201ENST00000507003 1829 ntBASIC4.76□□□□□ -1.65
SNX3O60493 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX3O60493 MAPK10-286ENST00000641208 8747 ntBASIC4.76□□□□□ -1.65
SNX3O60493 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SNX3O60493 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX3O60493 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 RN7SKP171-201ENST00000364417 303 ntBASIC4.75□□□□□ -1.65
SNX3O60493 RNA5SP122-201ENST00000384457 108 ntBASIC4.75□□□□□ -1.65
SNX3O60493 MIR600-201ENST00000385007 98 ntBASIC4.75□□□□□ -1.65
SNX3O60493 GSTM3P2-201ENST00000412746 530 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC022022.1-201ENST00000430304 178 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX3O60493 PTP4A1P3-201ENST00000433661 420 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX3O60493 AL390119.1-201ENST00000440329 312 ntBASIC4.75□□□□□ -1.65
SNX3O60493 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.75□□□□□ -1.65
SNX3O60493 EEF1B2P3-201ENST00000447718 678 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC000111.2-201ENST00000448200 210 ntBASIC4.75□□□□□ -1.65
SNX3O60493 IGHV5-78-201ENST00000450948 295 ntBASIC4.75□□□□□ -1.65
SNX3O60493 HMGB1P5-202ENST00000451497 985 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 RPS6P2-201ENST00000454208 705 ntBASIC4.75□□□□□ -1.65
SNX3O60493 HLA-DPA3-207ENST00000454398 229 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX3O60493 AC006967.1-201ENST00000467608 589 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.75□□□□□ -1.65
SNX3O60493 AC008410.1-201ENST00000483777 339 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC116562.1-201ENST00000485355 781 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC108022.1-201ENST00000493466 478 ntBASIC4.75□□□□□ -1.65
SNX3O60493 OR51K1P-201ENST00000510214 950 ntBASIC4.75□□□□□ -1.65
SNX3O60493 MYL12AP1-201ENST00000518490 515 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AP000859.1-201ENST00000525536 307 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.75□□□□□ -1.65
SNX3O60493 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX3O60493 OR8X1P-201ENST00000534542 869 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC122134.1-201ENST00000565664 1104 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AL121834.1-201ENST00000572284 509 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC027455.1-201ENST00000574104 594 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX3O60493 CBX3P2-202ENST00000583365 535 ntBASIC4.75□□□□□ -1.65
SNX3O60493 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX3O60493 AC079315.1-201ENST00000602952 623 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC098483.2-201ENST00000603158 454 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC012557.1-201ENST00000607115 611 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AL136370.1-201ENST00000608166 691 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AL359091.2-201ENST00000609303 556 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AL353726.1-201ENST00000614041 1000 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC245389.2-201ENST00000616023 576 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC023509.5-201ENST00000617434 807 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC242843.1-201ENST00000618702 573 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX3O60493 AP002371.2-201ENST00000624450 503 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AP003400.6-201ENST00000624698 740 ntBASIC4.75□□□□□ -1.65
SNX3O60493 AC080188.3-201ENST00000624842 748 ntBASIC4.75□□□□□ -1.65
SNX3O60493 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNX3O60493 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX3O60493 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX3O60493 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX3O60493 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SNX3O60493 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SNX3O60493 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms