Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDUFA1O15239 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NDUFA1O15239 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NDUFA1O15239 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 AL590763.1-201ENST00000398297 1545 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
NDUFA1O15239 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 GCNT6-201ENST00000379591 934 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 RNU1-82P-201ENST00000390851 165 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 HMGB3P7-201ENST00000400214 611 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 RN7SKP267-201ENST00000410381 285 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AL591848.1-201ENST00000413092 322 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.1□□□□□ -1.91
NDUFA1O15239 RPS23P10-201ENST00000416185 486 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 AL355433.1-201ENST00000422804 300 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.1□□□□□ -1.91
NDUFA1O15239 PRELID3BP10-201ENST00000431957 584 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 ELOCP18-201ENST00000434209 337 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFA1O15239 RHOT1P3-201ENST00000436571 331 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.1□□□□□ -1.91
NDUFA1O15239 AC112498.1-201ENST00000444401 332 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 H2AFZP5-201ENST00000446960 382 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AC073850.1-201ENST00000449243 255 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AL121877.1-201ENST00000453704 622 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.1□□□□□ -1.91
NDUFA1O15239 RPL23AP56-201ENST00000460778 453 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 NIP7P2-201ENST00000485801 544 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC3.1□□□□□ -1.91
NDUFA1O15239 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFA1O15239 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.1□□□□□ -1.91
NDUFA1O15239 AC147055.3-201ENST00000510547 851 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 SCARNA21.2-201ENST00000516600 166 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 EDDM3DP-201ENST00000554692 434 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 AP005119.2-201ENST00000579735 1105 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 MIR1269B-201ENST00000580405 75 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.1□□□□□ -1.91
NDUFA1O15239 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 AC010201.1-201ENST00000605051 540 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFA1O15239 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFA1O15239 LINC00901.1-201ENST00000617252 152 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 MIR4727-201ENST00000622232 55 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFA1O15239 LINC01739-205ENST00000641890 573 ntBASIC3.1□□□□□ -1.91
NDUFA1O15239 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NDUFA1O15239 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.1□□□□□ -1.91
NDUFA1O15239 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFA1O15239 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFA1O15239 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NDUFA1O15239 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NDUFA1O15239 NCLP2-201ENST00000416078 1462 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NDUFA1O15239 AL442639.1-201ENST00000625030 1899 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NDUFA1O15239 AC068254.2-201ENST00000623938 3577 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
NDUFA1O15239 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.09□□□□□ -1.91
NDUFA1O15239 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.09□□□□□ -1.91
NDUFA1O15239 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.09□□□□□ -1.91
NDUFA1O15239 RNU6-249P-201ENST00000363016 102 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 RNU4-4P-201ENST00000364588 130 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 RNU1-63P-201ENST00000383902 164 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 U3.30-201ENST00000391308 210 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.09□□□□□ -1.91
NDUFA1O15239 RN7SKP213-201ENST00000410746 298 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 CHEK2P3-201ENST00000416118 248 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.09□□□□□ -1.91
NDUFA1O15239 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 OR1H1P-201ENST00000448731 937 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 AL935212.3-201ENST00000450729 284 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 VN1R32P-201ENST00000452234 905 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 RN7SL515P-201ENST00000463999 297 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 RPS6P4-201ENST00000494693 758 ntBASIC3.09□□□□□ -1.91
NDUFA1O15239 GAPDHP56-201ENST00000506031 988 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms