Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
SOX1O00570 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX1O00570 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
SOX1O00570 RNA5SP46-201ENST00000362370 120 ntBASIC6.74□□□□□ -1.33
SOX1O00570 RN7SKP124-201ENST00000364730 341 ntBASIC6.74□□□□□ -1.33
SOX1O00570 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX1O00570 AC092745.2-202ENST00000411880 369 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX1O00570 HMGB3P23-201ENST00000414981 585 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX1O00570 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 AC091390.1-201ENST00000433904 331 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX1O00570 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX1O00570 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX1O00570 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 AC073522.1-201ENST00000483312 377 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AC069439.1-201ENST00000494739 167 ntBASIC6.74□□□□□ -1.33
SOX1O00570 CDH12P2-201ENST00000504393 298 ntBASIC6.74□□□□□ -1.33
SOX1O00570 BTG4P1-201ENST00000510421 183 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX1O00570 AC091133.4-201ENST00000511142 308 ntBASIC6.74□□□□□ -1.33
SOX1O00570 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 WBP1LP3-201ENST00000523033 208 ntBASIC6.74□□□□□ -1.33
SOX1O00570 HMGN2P6-201ENST00000551091 273 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.74□□□□□ -1.33
SOX1O00570 BPTFP1-201ENST00000579209 492 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
SOX1O00570 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX1O00570 AL157899.1-201ENST00000604110 936 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AL121890.2-201ENST00000617644 465 ntBASIC6.74□□□□□ -1.33
SOX1O00570 AL158209.2-201ENST00000619266 216 ntBASIC6.74□□□□□ -1.33
SOX1O00570 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.74□□□□□ -1.33
SOX1O00570 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 AC093909.5-201ENST00000621839 1799 ntBASIC6.74□□□□□ -1.33
SOX1O00570 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 FLJ42393-201ENST00000623801 2270 ntBASIC6.74□□□□□ -1.33
SOX1O00570 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SOX1O00570 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
SOX1O00570 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.74□□□□□ -1.33
SOX1O00570 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX1O00570 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX1O00570 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 CASC19-280ENST00000642102 1351 ntBASIC6.73□□□□□ -1.33
SOX1O00570 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SOX1O00570 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SOX1O00570 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SOX1O00570 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SOX1O00570 Y_RNA.38-201ENST00000362617 102 ntBASIC6.73□□□□□ -1.33
SOX1O00570 SNORD16-201ENST00000362803 99 ntBASIC6.73□□□□□ -1.33
SOX1O00570 RNA5SP333-201ENST00000363466 118 ntBASIC6.73□□□□□ -1.33
SOX1O00570 RNA5SP334-201ENST00000364825 118 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AC007066.1-201ENST00000392902 381 ntBASIC6.73□□□□□ -1.33
SOX1O00570 CCNG1P1-201ENST00000406783 885 ntBASIC6.73□□□□□ -1.33
SOX1O00570 RPL35AP24-201ENST00000413846 330 ntBASIC6.73□□□□□ -1.33
SOX1O00570 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX1O00570 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.73□□□□□ -1.33
SOX1O00570 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.73□□□□□ -1.33
SOX1O00570 PDSS1P2-201ENST00000449397 678 ntBASIC6.73□□□□□ -1.33
SOX1O00570 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms