Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 SULT1C2P2-201ENST00000562517 294 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC188H7C350 TVP23CP2-201ENST00000571473 623 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 SNORA74C-1-201ENST00000580726 201 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AL049844.2-201ENST00000604280 628 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 COX6CP4-201ENST00000605798 228 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AL391834.1-201ENST00000609609 560 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC109309.2-201ENST00000612597 332 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC188H7C350 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 MAPK10-286ENST00000641208 8747 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC008758.3-201ENST00000507003 1829 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AC092435.4-201ENST00000623012 4159 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC188H7C350 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CCDC188H7C350 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC188H7C350 AC007382.1-201ENST00000624376 2618 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 AL445487.1-201ENST00000415694 1580 ntBASIC5.08□□□□□ -1.6
CCDC188H7C350 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC188H7C350 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 MAPK10-303ENST00000641324 3959 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC188H7C350 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC188H7C350 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC188H7C350 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC188H7C350 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC188H7C350 IL6STP1-201ENST00000346911 1020 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 SNORA17.1-201ENST00000362945 126 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 RNA5SP510-201ENST00000364697 99 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 SNORD51.1-201ENST00000365405 77 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 AL021331.1-201ENST00000402817 582 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 VDAC1P9-201ENST00000412766 841 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 AL513321.1-201ENST00000441175 761 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC000111.2-201ENST00000448200 210 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 RNU7-27P-201ENST00000459281 62 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 CABYRP1-201ENST00000465493 1045 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 RPL23AP37-201ENST00000479658 549 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AL136038.1-201ENST00000497246 351 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AC104109.1-201ENST00000498563 436 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC021146.3-201ENST00000511911 260 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 RNU6-709P-201ENST00000517257 104 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 ATP5J2P6-201ENST00000565203 266 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 RN7SL52P-201ENST00000584271 284 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 EIF1P5-201ENST00000585002 234 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC105254.2-201ENST00000603636 436 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AC005377.1-201ENST00000605126 456 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 uc_338.18-201ENST00000615451 175 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AL122125.1-201ENST00000616999 600 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC188H7C350 AC026124.2-201ENST00000621847 656 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AC004232.3-201ENST00000622977 525 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AC005086.4-201ENST00000623065 213 ntBASIC5.07□□□□□ -1.6
CCDC188H7C350 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC188H7C350 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC188H7C350 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC188H7C350 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC188H7C350 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC188H7C350 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC188H7C350 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC188H7C350 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC188H7C350 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 MIR195-201ENST00000385194 87 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms