Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 BNIP3P41-202ENST00000616656 861 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 AC021106.3-201ENST00000623925 531 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 TLK1P1-201ENST00000456760 2440 ntBASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEDD8-MDP1E9PL57 Z98755.1-201ENST00000407015 1384 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 RNU1-82P-201ENST00000390851 165 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 SETP15-201ENST00000412724 337 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AL356968.2-201ENST00000412769 1257 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC098592.2-201ENST00000413158 265 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 OR6C64P-201ENST00000419708 825 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 MRPL35P2-201ENST00000448009 511 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 CEACAMP6-201ENST00000452007 574 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 RPL31P53-201ENST00000457065 348 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SL517P-201ENST00000462240 305 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC108043.1-201ENST00000512696 574 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 RNU1-6P-201ENST00000516290 144 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 RNU6-709P-201ENST00000517257 104 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AL110118.1-201ENST00000553543 400 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC018552.1-201ENST00000562099 811 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC104820.1-201ENST00000624183 307 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 TTC39DP-201ENST00000416781 1688 ntBASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.92□□□□□ -1.62
NEDD8-MDP1E9PL57 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 RPS3AP23-201ENST00000401762 784 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC009480.2-201ENST00000422916 432 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC068287.1-201ENST00000430283 295 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 NDUFA5P1-201ENST00000433858 341 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 CYCSP24-201ENST00000445119 316 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC245028.2-201ENST00000458673 253 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC091544.1-201ENST00000484702 348 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SL346P-201ENST00000491561 294 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 RN7SKP92-201ENST00000517266 244 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AGGF1P9-201ENST00000561884 913 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC022387.2-201ENST00000604050 448 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 MIR6810-201ENST00000622701 70 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC012414.7-202ENST00000622705 1090 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 FRG1EP-201ENST00000634469 770 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC073869.10-201ENST00000642016 354 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 AC007382.1-201ENST00000624376 2618 ntBASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NEDD8-MDP1E9PL57 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEDD8-MDP1E9PL57 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms