Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 OR7E128P-201ENST00000532736 1024 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC084036.1-201ENST00000609190 508 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AP005131.7-201ENST00000610087 611 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AL627230.1-201ENST00000613077 211 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AL591926.8-201ENST00000616876 211 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 CASC19-284ENST00000642142 1868 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 RN7SKP95-201ENST00000362860 303 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC007618.1-201ENST00000366455 732 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL136116.2-201ENST00000404020 785 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL512504.1-201ENST00000415494 778 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC073136.2-201ENST00000417282 849 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 TRIM60P13-201ENST00000432350 1283 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC007563.3-201ENST00000433233 371 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 CACYBPP1-201ENST00000438592 684 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 CASP3P1-201ENST00000446037 609 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 KNOP1P3-201ENST00000446933 426 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 RPL5P13-201ENST00000462840 709 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 RN7SL443P-201ENST00000464331 290 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 RNU6-491P-201ENST00000516099 110 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 RNA5SP228-201ENST00000516232 133 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AF186190.1-201ENST00000517470 480 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC008033.2-201ENST00000542626 177 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC006349.1-201ENST00000555526 235 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 MIR3936-201ENST00000584304 110 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC068020.1-201ENST00000594215 661 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC130352.1-201ENST00000602979 661 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC112694.2-201ENST00000623697 768 ntBASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA2E9PIF3 AC007996.1-201ENST00000620414 2821 ntBASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 RNA5SP428-201ENST00000365129 132 ntBASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 GSTA12P-201ENST00000402398 508 ntBASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 Z97832.1-201ENST00000402490 328 ntBASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 AL035079.1-201ENST00000405210 287 ntBASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 COX5BP7-201ENST00000414780 274 ntBASIC4.59□□□□□ -1.67
NPIPA2E9PIF3 RPA2P2-201ENST00000419698 796 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms