Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC021749.1-201ENST00000604322 607 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AP000894.4-201ENST00000610185 483 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC009237.15-201ENST00000610252 501 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC015712.7-201ENST00000615211 635 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC114774.1-201ENST00000507410 1770 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AC114786.1-201ENST00000512892 1415 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 USP9YP4-201ENST00000424401 1745 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 AL353743.4-201ENST00000422653 1547 ntBASIC6.3□□□□□ -1.4
COL4A3BPQ9Y5P4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL353796.1-201ENST00000561542 3241 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 BCORP1-203ENST00000513194 5093 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 RNU11-201ENST00000387069 134 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL079342.2-201ENST00000403367 482 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 RN7SKP97-201ENST00000410966 333 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 RNU4-22P-201ENST00000411058 166 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 HIGD1AP15-201ENST00000416198 280 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL354868.1-201ENST00000417077 482 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 FAM96AP1-201ENST00000430879 482 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC073052.1-201ENST00000440417 714 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC004815.1-201ENST00000484185 331 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC023632.1-201ENST00000518463 375 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 OR8Q1P-201ENST00000526467 655 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC137627.1-201ENST00000545761 289 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL442163.2-201ENST00000553912 710 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 HSPE1P2-201ENST00000554777 306 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 MIR4666A-201ENST00000580160 79 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 MIR1273E-201ENST00000581165 102 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 CCDC58P3-201ENST00000590792 430 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL360012.1-201ENST00000602813 131 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AL592148.2-201ENST00000612210 372 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AC087821.2-201ENST00000637086 450 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 Z95114.1-201ENST00000624264 14574 ntBASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A3BPQ9Y5P4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AL512646.1-201ENST00000269395 1077 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 RNU6-178P-201ENST00000384631 104 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 AL513175.2-201ENST00000422071 443 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 OR10T1P-201ENST00000424327 947 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 RAC1P8-201ENST00000427086 527 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 TMEM183AP1-205ENST00000432739 290 ntBASIC6.28□□□□□ -1.4
COL4A3BPQ9Y5P4 TXNP5-201ENST00000441043 315 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms