Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB1Q9Y5F3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC000367.1-201ENST00000452711 1766 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 U3.10-201ENST00000364459 214 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RN7SKP59-201ENST00000410520 314 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RN7SKP222-201ENST00000410651 315 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 MRPL53P1-201ENST00000414323 319 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 BMS1P17-202ENST00000416720 316 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 CFL1P1-202ENST00000432948 411 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 CYCSP11-201ENST00000436426 315 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 PTMAP6-201ENST00000439110 327 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 CYCSP51-201ENST00000443545 318 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RPS17P15-201ENST00000475609 349 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RN7SL570P-201ENST00000484405 292 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RN7SL184P-201ENST00000488308 297 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC138938.1-201ENST00000515431 782 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 SNORA43.3-201ENST00000517240 103 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 MTCO1P47-201ENST00000523889 1271 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 YWHABP2-201ENST00000540201 713 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC009962.1-201ENST00000567327 3813 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC099676.1-201ENST00000608886 657 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AL136295.6-201ENST00000610486 658 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RN7SL544P-201ENST00000617232 284 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RN7SL763P-201ENST00000620922 284 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AL512506.2-201ENST00000624472 458 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC138393.1-206ENST00000540997 1886 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 AC093311.1-201ENST00000506586 2021 ntBASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
PCDHB1Q9Y5F3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AC018628.1-201ENST00000624147 3819 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 GAPDHP24-201ENST00000328713 983 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 NACA3P-201ENST00000359690 648 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 SNORA62.2-201ENST00000364672 152 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 RN7SKP124-201ENST00000364730 341 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 SNORA40.2-201ENST00000390847 128 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 RNU4-34P-201ENST00000410431 124 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AL357752.1-201ENST00000412817 349 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AC027644.1-201ENST00000419595 298 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 OR5AW1P-201ENST00000426334 1006 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AP001324.1-201ENST00000428553 399 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AL929288.2-201ENST00000446368 407 ntBASIC5.69□□□□□ -1.5
PCDHB1Q9Y5F3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms