Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNA5SP249-201ENST00000516127 99 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 RN7SKP260-201ENST00000516907 149 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC008147.3-201ENST00000548666 354 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC105254.2-201ENST00000603636 436 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC104687.2-201ENST00000604442 342 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 NF1P10-201ENST00000613227 742 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 Z73965.1-201ENST00000623412 2297 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC091046.3-201ENST00000631455 1574 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 MTCO1P11-201ENST00000429111 1528 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC009643.2-201ENST00000603543 1448 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 SNORA66-201ENST00000384792 133 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC012519.1-201ENST00000424588 610 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC073052.1-201ENST00000440417 714 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 CNOT7P2-201ENST00000441051 832 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AL354714.3-201ENST00000447284 493 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 BUD31P2-201ENST00000449374 300 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 TCEA1P1-201ENST00000449716 880 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 RN7SL799P-201ENST00000475891 298 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 HMGN2P25-201ENST00000486956 268 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC117525.1-201ENST00000515228 503 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 SMARCE1P4-201ENST00000523647 241 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC090515.3-201ENST00000560431 315 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 PSMA6P4-201ENST00000603247 718 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC007423.1-201ENST00000605009 627 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 AC074029.4-201ENST00000624796 1859 ntBASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHBDD3Q9Y3P4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AL592182.3-201ENST00000642132 3304 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 SNURFL-201ENST00000309296 343 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 RPL23P2-201ENST00000320371 421 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 RNU6-984P-201ENST00000363236 109 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 AP000580.1-201ENST00000404439 358 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 U3.36-201ENST00000408418 213 ntBASIC4.29□□□□□ -1.72
RHBDD3Q9Y3P4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms