Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 SLC25A36P1-201ENST00000590111 465 ntBASIC4.45□□□□□ -1.7
CCDC88CQ9P219 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC88CQ9P219 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 CENPIP1-201ENST00000425713 902 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC073143.1-201ENST00000436316 395 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 TDGF1P1-201ENST00000445734 527 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC009704.2-201ENST00000618739 483 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AL731566.2-201ENST00000618971 317 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AC007382.1-201ENST00000624376 2618 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 GVINP1-202ENST00000531871 7271 ntBASIC4.44□□□□□ -1.7
CCDC88CQ9P219 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC88CQ9P219 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 MTHFD2P5-201ENST00000320415 844 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 RPS3AP23-201ENST00000401762 784 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AL591848.1-201ENST00000413092 322 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AL450023.3-201ENST00000440592 271 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AC026979.1-201ENST00000492525 396 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 PGBD4P4-201ENST00000509673 613 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 RNU1-6P-201ENST00000516290 144 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AP006289.1-201ENST00000538089 277 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 MIR4697-201ENST00000582977 78 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AC130352.1-201ENST00000602979 661 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 MTCO1P15-201ENST00000529569 1526 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AL136116.2-201ENST00000404020 785 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AC092570.3-201ENST00000420113 693 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 RPL34P6-201ENST00000432390 345 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 GSTA7P-201ENST00000438425 448 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AC008782.1-201ENST00000603386 430 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 AL121932.1-201ENST00000605542 214 ntBASIC4.43□□□□□ -1.7
CCDC88CQ9P219 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC88CQ9P219 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 RN7SKP167-201ENST00000411047 285 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 AC119751.6-201ENST00000416712 186 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 RPL21P91-201ENST00000429231 479 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 CEACAMP6-201ENST00000452007 574 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 AL445433.1-201ENST00000457507 257 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 CYCSP34-201ENST00000458172 304 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 RN7SL385P-201ENST00000468873 276 ntBASIC4.42□□□□□ -1.7
CCDC88CQ9P219 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC88CQ9P219 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms