Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 RPL26P30-202ENST00000602923 645 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.15□□□□□ -1.74
KIAA1549Q9HCM3 AL022311.1-201ENST00000623726 19416 ntBASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 AC104260.2-201ENST00000623551 3497 ntBASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 VN2R3P-201ENST00000422626 1412 ntBASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
KIAA1549Q9HCM3 MTHFD2P5-201ENST00000320415 844 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 NACAP7-201ENST00000407371 609 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 SCARNA10-201ENST00000459255 330 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC006272.2-201ENST00000594725 163 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC002044.3-201ENST00000623314 541 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC097461.1-201ENST00000568928 2821 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 HSPE1P16-201ENST00000426640 348 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 RPS3AP54-201ENST00000435535 734 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 NPM1P33-201ENST00000438918 872 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 RPL23AP37-201ENST00000479658 549 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC020910.2-201ENST00000603635 610 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 OR7A19P-201ENST00000608051 733 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC019193.2-201ENST00000610012 634 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC100847.1-201ENST00000611316 481 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AC234782.5-201ENST00000617723 324 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 AP003497.2-201ENST00000624220 967 ntBASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KIAA1549Q9HCM3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 IGKV7-3-201ENST00000357453 298 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RNU1-130P-201ENST00000363930 160 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AC234779.1-201ENST00000425910 285 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AP001324.1-201ENST00000428553 399 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 GTF3AP5-201ENST00000442645 697 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AK3P4-201ENST00000504283 583 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 RNA5SP249-201ENST00000516127 99 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AC105105.5-201ENST00000622635 1294 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AC011944.2-201ENST00000624440 683 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 TCP1P3-201ENST00000414406 1498 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AL022393.1-201ENST00000625142 1677 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 OR14L1P-202ENST00000641545 3009 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.13□□□□□ -1.75
KIAA1549Q9HCM3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms