Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC073387.2-201ENST00000604797 784 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AL445670.1-201ENST00000618889 801 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC068137.3-201ENST00000639191 341 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 AC073869.6-201ENST00000640656 341 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS11Q9H270 AC017007.4-201ENST00000503353 1352 ntBASIC5.88□□□□□ -1.47
VPS11Q9H270 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS11Q9H270 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS11Q9H270 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS11Q9H270 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS11Q9H270 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 RNA5SP110-201ENST00000362638 115 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 Y_RNA.88-201ENST00000363029 99 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 RNU6-761P-201ENST00000384148 107 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS11Q9H270 RNU2-18P-201ENST00000411224 162 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 MTCO1P17-201ENST00000411522 491 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AL513325.1-201ENST00000417716 1034 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 OR6C64P-201ENST00000419708 825 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 RNGTTP1-201ENST00000420965 728 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AC098614.3-201ENST00000438957 440 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 MYO5BP2-201ENST00000449815 1277 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 RNU7-125P-201ENST00000458760 62 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 RN7SL552P-201ENST00000462094 276 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AC008629.2-201ENST00000503783 483 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 HMGN1P16-201ENST00000508308 283 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 PGBD4P4-201ENST00000509673 613 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 GAPDHP62-201ENST00000515313 990 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AC138517.1-201ENST00000515724 568 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS11Q9H270 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 MIR548Y-201ENST00000582739 110 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 SMIM12P1-201ENST00000603004 274 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AP002906.1-201ENST00000603405 233 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 NANOGP3-201ENST00000605855 286 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 TUSC7.1-201ENST00000610969 165 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AC007742.2-201ENST00000618226 398 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AL512652.1-201ENST00000619006 500 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AL590240.3-201ENST00000621416 943 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 SAMMSON-209ENST00000641222 1100 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AL354854.1-201ENST00000455940 1363 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 AL049737.1-201ENST00000413920 1403 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS11Q9H270 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VPS11Q9H270 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS11Q9H270 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
VPS11Q9H270 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.87□□□□□ -1.47
VPS11Q9H270 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VPS11Q9H270 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS11Q9H270 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms