Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
UPF3BQ9BZI7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
UPF3BQ9BZI7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC133552.1-201ENST00000569988 4007 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 DHX9P1-201ENST00000436565 3076 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 SETP15-201ENST00000412724 337 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC119751.6-201ENST00000416712 186 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 FABP7P1-201ENST00000424004 391 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 SLC25A18P1-201ENST00000449385 454 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC090589.1-201ENST00000473109 362 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 RPL23AP37-201ENST00000479658 549 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 RN7SL591P-201ENST00000496150 292 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 RN7SKP46-201ENST00000515942 234 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC133555.2-201ENST00000550213 292 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 SETP1-201ENST00000556014 845 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 AC112694.2-201ENST00000623697 768 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 PCAT14-202ENST00000627127 3935 ntBASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.64□□□□□ -1.51
UPF3BQ9BZI7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 RNA5SP296-201ENST00000410523 111 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 OR51B3P-201ENST00000412287 913 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 OR6C64P-201ENST00000419708 825 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 RPL12P43-201ENST00000420608 499 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 GLUD1P9-201ENST00000420997 1173 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AC009480.2-201ENST00000422916 432 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 RPL10P17-201ENST00000453852 316 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 RN7SL354P-201ENST00000469282 294 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AC130352.1-201ENST00000602979 661 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AL034374.2-201ENST00000605281 548 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 FAM27B-201ENST00000610601 213 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 CR381572.2-201ENST00000624852 397 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AL121950.1-201ENST00000624993 2077 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 AC097461.1-201ENST00000568928 2821 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 CDY11P-201ENST00000447168 1651 ntBASIC5.63□□□□□ -1.51
UPF3BQ9BZI7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 RNA5SP191-201ENST00000362585 102 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AL590762.2-201ENST00000395798 571 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AC079168.2-201ENST00000453977 416 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AURKAPS2-201ENST00000454983 333 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 SLC25A15P5-201ENST00000508033 253 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AC008033.2-201ENST00000542626 177 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AC015912.2-201ENST00000571053 181 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AC073575.2-201ENST00000614212 627 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AC234782.5-201ENST00000617723 324 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 SDAD1P1-202ENST00000524156 2051 ntBASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
UPF3BQ9BZI7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
UPF3BQ9BZI7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
UPF3BQ9BZI7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms