Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC090142.1-201ENST00000465776 462 ntBASIC6.99□□□□□ -1.29
SCAPERQ9BY12 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCAPERQ9BY12 RNA5SP143-201ENST00000516936 115 ntBASIC6.99□□□□□ -1.29
SCAPERQ9BY12 AC006453.5-201ENST00000636451 619 ntBASIC6.99□□□□□ -1.29
SCAPERQ9BY12 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SCAPERQ9BY12 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SCAPERQ9BY12 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SCAPERQ9BY12 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 AL138820.1-201ENST00000617901 5305 ntBASIC6.98□□□□□ -1.29
SCAPERQ9BY12 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 AC011998.1-201ENST00000433403 117 ntBASIC6.98□□□□□ -1.29
SCAPERQ9BY12 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 RPS7P7-201ENST00000463499 571 ntBASIC6.98□□□□□ -1.29
SCAPERQ9BY12 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.98□□□□□ -1.29
SCAPERQ9BY12 AC108475.1-201ENST00000507880 950 ntBASIC6.98□□□□□ -1.29
SCAPERQ9BY12 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 PCAT14-202ENST00000627127 3935 ntBASIC6.98□□□□□ -1.29
SCAPERQ9BY12 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.98□□□□□ -1.29
SCAPERQ9BY12 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 AC010266.2-201ENST00000564741 3255 ntBASIC6.97□□□□□ -1.29
SCAPERQ9BY12 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 MIR372-201ENST00000362225 67 ntBASIC6.97□□□□□ -1.29
SCAPERQ9BY12 Z98745.1-201ENST00000402553 494 ntBASIC6.97□□□□□ -1.29
SCAPERQ9BY12 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 TRIM51GP-201ENST00000534741 1350 ntBASIC6.97□□□□□ -1.29
SCAPERQ9BY12 AC005261.4-201ENST00000600047 1385 ntBASIC6.97□□□□□ -1.29
SCAPERQ9BY12 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SCAPERQ9BY12 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
SCAPERQ9BY12 AC135352.1-201ENST00000506173 1418 ntBASIC6.96□□□□□ -1.29
SCAPERQ9BY12 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.96□□□□□ -1.29
SCAPERQ9BY12 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCAPERQ9BY12 ICE2P1-201ENST00000512800 1849 ntBASIC6.96□□□□□ -1.29
SCAPERQ9BY12 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCAPERQ9BY12 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SCAPERQ9BY12 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.96□□□□□ -1.29
SCAPERQ9BY12 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.96□□□□□ -1.29
SCAPERQ9BY12 RNU1-132P-201ENST00000364300 164 ntBASIC6.96□□□□□ -1.3
SCAPERQ9BY12 NRBF2P2-201ENST00000413087 861 ntBASIC6.96□□□□□ -1.3
SCAPERQ9BY12 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 OR8A2P-201ENST00000528631 952 ntBASIC6.96□□□□□ -1.3
SCAPERQ9BY12 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCAPERQ9BY12 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 EIF2AP4-201ENST00000424793 1781 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 TCP11X1-202ENST00000622971 1372 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 MIR383-201ENST00000362257 73 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 SDHCP2-201ENST00000398565 501 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 HMGN2P27-201ENST00000427352 270 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 NIFKP7-201ENST00000503365 834 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 FKBP1BP1-201ENST00000553366 325 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 AC004817.4-201ENST00000602396 3625 ntBASIC6.95□□□□□ -1.3
SCAPERQ9BY12 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCAPERQ9BY12 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms